Pairwise Alignments

Query, 329 a.a., CobD-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 311 a.a., cobalamin biosynthesis protein CobD from Burkholderia phytofirmans PsJN

 Score = 83.2 bits (204), Expect = 8e-21
 Identities = 73/286 (25%), Positives = 120/286 (41%), Gaps = 6/286 (2%)

Query: 36  PREMQPLIWFSHLAKQLAAKVNRPGRAPSQQATAGFLAMLLLVFPFWAIITFLLELAAFP 95
           PR   PL+ F + AK+L  + N   R   +   A  LA++  V   W ++  L   AA  
Sbjct: 24  PRAAHPLVGFGNWAKRLETRYNTGRRLRLKGLLAWSLAVMPPVLIAWCLVAVLPFYAAC- 82

Query: 96  WFFEFLVLYLCLSDAGFSQVADEIAKALNREDNASAKKLLQPWVVRDTDNLSEVGLTKAT 155
                L+L+  L      +    IA+AL + D A A+ L    V R+T +  E  L++A 
Sbjct: 83  -VVHVLLLWFALGARSLHEHIAPIAQALVQRDLAQARLLTARIVSRETADADEGALSRAA 141

Query: 156 IEKLATAPIYGTASTIFFFAIAGAPMVLAVRMIKQLELSWPPIQPKYQYFCRTVHTLSTA 215
           +E             +F+FA+AG P  LA R+   L+  W    P+Y  +      +   
Sbjct: 142 VESALENGNDAIFGALFWFAVAGGPGALAFRLANTLDAMWGYRTPRYLRYGWAAARIDDV 201

Query: 216 LLAIPAWLWSLSIAIQGGPKALALLFR--TSKNHPALRGYVMSVSLVANILRIELGGPQK 273
           L  IPA L + S A+ G  +     +R    +      G VM+    A  L + +GGP  
Sbjct: 202 LNWIPARLTAASYALLGDTRTAWRCWREQAPRWDSPNAGPVMASG--AGSLNVLIGGPAV 259

Query: 274 FSGQRIDVAKVVYGPQPHHEMIAPAIKLTSRACAIWFSFITLLPFI 319
           + G       + +G       ++ A+ L  R   +W + + +L  +
Sbjct: 260 YHGALEHRPTLGFGHTAKASHVSAALMLVERTVILWLAVLIVLALL 305