Pairwise Alignments

Query, 262 a.a., transcriptional regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 40  ISLQPKFIEVLSYLALRYPEVVTRDELIDKVWEGNVYVGTKALTNAIWHLRQQLSPFAQE 99
           + L+PK  ++L  L      V  RDEL++ +W    +  T+ + N I HLRQ+L      
Sbjct: 150 VELKPKEFQLLLMLLQNPGRVYHRDELLNLIWGYQYFPTTRTVDNHILHLRQKLPQLD-- 207

Query: 100 SGVIETVRKTGYRL 113
              IET+R  GYRL
Sbjct: 208 ---IETLRGVGYRL 218