Pairwise Alignments

Query, 1007 a.a., hypothetical TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 914 a.a., TonB-dependent receptor from Burkholderia phytofirmans PsJN

 Score =  153 bits (387), Expect = 5e-41
 Identities = 232/1054 (22%), Positives = 402/1054 (38%), Gaps = 187/1054 (17%)

Query: 1    MKKKLLTLAI------QASMFGIVPSVAWAAEPIEVKAVKENATRNE---------TETA 45
            MK++ L LAI      + ++  ++   A+A            AT  E         T +A
Sbjct: 1    MKQRALALAIRRIVWAELALSAVIAVPAFAQSQPATTGTAAGATTTESTPATGAAATPSA 60

Query: 46   DKNDG---------IEKVTVTGSRIKRDSFSLSTPLQGLDAKDIADSGIGSLADILVDQI 96
            D N           ++K  VTGS I+      +T +Q +  KDI  SG  ++AD L    
Sbjct: 61   DGNTATPTGKGVQQLKKFEVTGSLIRTSDKVGNTEVQTITTKDIQQSGYTTVADFLRGTS 120

Query: 97   PALAEGVSSTNSQSSVQNTGLSTIDLRNLGTDRTLTLIDGRRVVSN----SYSGNYVSLS 152
                     T   SS Q  G   I LR L    TL L+DG+RV +     +++  +  ++
Sbjct: 121  ANSGSSWGQTTMNSSAQGGG--GIALRGLSEKYTLVLVDGQRVANYGKAVNFTDTFFDVN 178

Query: 153  TIPAAMVDKVEIITGGASAVYGSDAIAGVVNIITQQNKTGFEINARGGETTEGGGRE--T 210
            +IP  M+D ++I+  GA +VYGSDAIAGVVNIIT+++  G +I+ + G+    G  +   
Sbjct: 179  SIPLNMIDHIDIVKTGAVSVYGSDAIAGVVNIITKKDFQGLQIDGQLGKAQHPGDAQGNF 238

Query: 211  TVDAGYGADFNSDKGYIYASATYDKQHGLFATDRERALYESSFAYD-------KKQMCNT 263
            +V  G G D N D+  + A+A+Y +  G    DR+    +    +             + 
Sbjct: 239  SVLGGIG-DLNGDRFNVTAAASYYRDTGSSLGDRDMTAGQDFSQFPGGLAGPLGPNQQSY 297

Query: 264  MNTADGYQCMRDITPEDWRERSNDIVGGRFKSNAWWYDGTELKTDFKEERDGYNGYTTGL 323
              TADG        P      +        KSN                        +  
Sbjct: 298  WTTADGTNTALSPCPPGSVSANG---ASTCKSNP----------------------ASAT 332

Query: 324  LKVPEDT-LATAVKVNYDLSESVRANAQVQFSRNTAFRRTDAEGQDYNDAEL-YIDPITG 381
              VP  T L   V+  + +++ V+A A    SR+   +    EG     ++    +P TG
Sbjct: 333  SLVPAITRLNAKVRGTFKINDDVQAYADFWVSRDETVQN---EGPAVLSSQTNAFNPATG 389

Query: 382  LPGMIDAGSILANNPYIPAEIAATGGKSITWDRRFEEVGPVESDNERTTLRTWAGLQGDL 441
               +  + ++   NPY P          +     +     V +D   T  R   G++G  
Sbjct: 390  -SALPLSRTVSGTNPYNPF--------GVPTQINYTFPNTVSADTVSTFWRALTGVKGSF 440

Query: 442  ----FETWTWDASVGYGQFEQRQRRSNEISIRRLRNAL-NAVYAADGVTIQCASEAARAE 496
                F  W W A  G+ Q        N +++  L N L N V+                 
Sbjct: 441  TTAKFGDWDWSADYGHSQSTVDTTYGNALNVAGLENILQNGVFN---------------- 484

Query: 497  GCVPVNIFGEGSISKEGADYIRANPYINTDITQFNAL--GYISGELFELPAGGVQSAFGM 554
                   F   S +  G + +  N Y    I++ +++     +  LF LP G V   FG 
Sbjct: 485  -------FSNPSATPNGLNGVFQNDY-EQAISKLDSVTAKTSTSNLFTLPGGPVGVGFGT 536

Query: 555  EYRRDTQAVDTDKAMRGDAITFNDVPPFEGDVTVWEAFGEANLPLLRDMSFANKLDVDVS 614
            E+R ++  +++            +V   +G+  V   + + ++P++ +++F        +
Sbjct: 537  EFRHESNIINSRTYSALGITAPANVQTVDGERNVAAVYYQVDIPIIHNLTFTQ------A 590

Query: 615  LRLADYSQKNIDLMSSYRTGILWEPIANYALRANYSRSQRAPNITELISPPRGDYDSIRD 674
             R   YS        S+   + ++P+      A+YSR  RAP + E              
Sbjct: 591  GRYDHYSDFGGAFSPSF--ALRFQPVRAITAFASYSRGFRAPTLVE-------------- 634

Query: 675  ICNGVTATSTGAGHDSCRLDPGIAVAIASTGTFKAETGSKYSPNAGNENLTEETADTYTL 734
                  + +T   H +  +DP        T  F  E  +      GN  L  E    Y +
Sbjct: 635  -----NSQATYLAHQNL-VDPNDPSG-TPTKHFTTEQVN------GNPALQPERTKNYNI 681

Query: 735  GFTMAPAFLEGFNLAVDYYDIKVADAIGSLSNEDILAECYNSSNPYGAGNEYCQDITRDT 794
            GF ++P      ++   +Y I +   IG+     ++    +++NP         ++ R+ 
Sbjct: 682  GFQLSPD--SSTDIGAAFYKIHIDGVIGTQDPNAVM----DANNP--------SNVIRNP 727

Query: 795  EGQITQVIQQELNLNDIVTRGIDFAMAYEWEL-ADYGELSLNTNWTHVLEYSSSYYGADG 853
            +G +  + +Q +NL  + T G D  M +   +   YG  +L  +W +V  +  +  GA  
Sbjct: 728  DGTVAYIKEQFVNLGSLDTDGFD--MNFRKSVGTKYGTFTLAGDWAYVWHFKLNSPGAP- 784

Query: 854  LVAEDYVGELTSGIFEDRGTLSLTWSNDDWRVRWSAKYKSAMVDSHDRVEEWNVLKAENQ 913
               +D+ G     + +  G  +  W  +   + W  +  +  +         N + +E  
Sbjct: 785  --TQDFAGN-NLALLQPFGASNPRWKGNT-SLSWDYRKLTTTLTWQYTGPYTNAVASE-- 838

Query: 914  AKLDAGDASAVANPETPEFLFYGSYITHDLSVSYTMDVSQAELRLYGGLRNIFDNQGPWV 973
                 GD            L   SY   +L  +Y          +YGG+ NIFD + P+ 
Sbjct: 839  ----FGDGGT---------LSVASYSQFNLMATYR---GFKNWTIYGGINNIFDRKPPFD 882

Query: 974  ADGGDLIETGTGNYSSAYGGGVGRYAYLGAELKF 1007
             +     +  TG   S Y   +GR+  +GA  +F
Sbjct: 883  VEWQATPDI-TGYDQSLY-TNIGRFFQVGASYRF 914