Pairwise Alignments

Query, 428 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 435 a.a., FAD dependent oxidoreductase (RefSeq) from Shewanella sp. ANA-3

 Score =  342 bits (877), Expect = 1e-98
 Identities = 171/419 (40%), Positives = 251/419 (59%), Gaps = 3/419 (0%)

Query: 9   SYYAASANDKVERARLQESIEADVCVIGAGYTGLSAALHLLELGFSVVVLDAARIGWGAS 68
           SYY  +A +     +L+  +  DVC+IG G++G++ A+ L + G +VV+L+A RIGWGAS
Sbjct: 15  SYYVDTAKEIYAHPQLEGKVSTDVCIIGGGFSGINTAIELRQKGLNVVLLEAKRIGWGAS 74

Query: 69  GRNGGQIVNSYSRDIDTIEKTVGKEQAKLFGKMAFEGGRIIRERIAKYNISCDLKDGGVF 128
           GRNGG+++     D       +G+E      +M FE   I+R RI  ++I CDL+ G   
Sbjct: 75  GRNGGELIRGIGHDPAQFINEIGQEGVSAIEQMGFEAVEIVRNRIQTHHIDCDLQMGYCD 134

Query: 129 AAMNEKQMGHLRHQKQLWESHGHMGQLELLDGKGIRSVVNTERYVGGMLDKSGGHIHPLN 188
            A+  + M  L  +    +  G+  +++LL    +  V+ ++ Y G ++D   GH+HPLN
Sbjct: 135 LAVKPRHMLELEQEFDHLKRLGYQHEIKLLTQSQLGEVIGSDFYQGALVDMGSGHLHPLN 194

Query: 189 LALGEARAVESLGGKIFEDSAVLRVDEGDNPVVHTATGSVKAKFVVVAGNAYLG-KLMPE 247
           LALGEAR    LG ++FE SA  ++   D P V TA G V  ++VV+AGNAY+G KL   
Sbjct: 195 LALGEARVARDLGAQLFEYSAAEKIIPRDKPRVLTAKGEVTCQYVVLAGNAYIGHKLNSY 254

Query: 248 LQAKSMPCGTQVITTEPLDEDLAASLLPQDYCVEDCNYLLDYFRLSGDKRMIYGGGVVYG 307
           +  K +P G+ ++ TEPL E    S++PQ+    D    LDYF LS D+R+++GG   Y 
Sbjct: 255 IGGKVLPAGSYLLATEPLTEVQCQSIIPQNMAFADMRIALDYFHLSADRRLLFGGLCTYS 314

Query: 308 ARDPADIESLIIPNMLKTFPQLKGVKVDYAWTGNFLLTLSRLPQVGRI--GKNIYYSQGC 365
            +DP DIE+ + PN+ K FPQLKGV++DY W G   +  +R+PQ+GR+    NI+Y+Q  
Sbjct: 315 GKDPKDIEAALRPNLEKVFPQLKGVRIDYEWGGMIGIGANRMPQIGRLPDASNIFYAQAY 374

Query: 366 SGHGVTYTHLAGKLIAEMLNGQATRFDAFAALPHYPFPGGHALRVPFSALGAWYYSLRD 424
           +GHGV  TH+A KL+AE +  QA  FD FA + H  FPGG   R P  A G  Y+  +D
Sbjct: 375 AGHGVNATHMAAKLLAEAICQQAGYFDVFAKIKHMTFPGGPTFRSPMLAAGMLYHRFKD 433