Pairwise Alignments

Query, 271 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 272 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  173 bits (438), Expect = 4e-48
 Identities = 103/261 (39%), Positives = 158/261 (60%), Gaps = 15/261 (5%)

Query: 16  LFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFKDQQILDAVWTSLRIAFYSSTMAV 75
           LFLYAP+ ++V++SFN  +  + + GFS  WYG+   +  ++ A+  SL IAF S+T+A 
Sbjct: 10  LFLYAPIALVVLFSFNAGRNASEFTGFSLAWYGKALGNTFLVSALQNSLIIAFTSATLAA 69

Query: 76  IIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLFVHMADLLG------W 129
           + GTMAA  M R   S  +     +  A +V+P V+ G++ L+  V +   +       W
Sbjct: 70  VFGTMAALGMERLG-SRMRALFDALFAAAIVVPGVVIGIATLVALVAVFSFVNPTIAALW 128

Query: 130 PKER------GMVTVWIAHSTFCAAYVAVVVSSRLRELDRSIEEAAMDLGATPLKTFFLI 183
           P E+      G  ++  AH  F  A V ++V +R+  L R I EA+ DL ATPL TF LI
Sbjct: 129 PGEQPPQLGLGYGSIIAAHGLFSMALVTMIVKARIASLGRDIVEASGDLYATPLTTFRLI 188

Query: 184 TVPMISPALVAGWLLSFSLSLDDLVISSFASGPGATTLPMVVFSSVRLGVSPKINALATL 243
            +P I P+++AG+LL+F+ S DD +I+ F +G   TTLP+ VF+S+R GV+P+INA+ATL
Sbjct: 189 VLPQILPSILAGFLLAFTFSFDDFIIAFFVAG-SKTTLPIYVFASIRRGVTPEINAIATL 247

Query: 244 IILCVSLIAFLSWYMARRAEK 264
            +L  SL+  L+  +  R +K
Sbjct: 248 -VLVASLLLILTARVLMREKK 267