Pairwise Alignments

Query, 271 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 271 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella amazonensis SB2B

 Score =  471 bits (1212), Expect = e-138
 Identities = 236/267 (88%), Positives = 252/267 (94%)

Query: 1   MKKLSFSSVMLWFGLLFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFKDQQILDAV 60
           MKKLSFS+VMLW GL+FLYAPM IL+ YSFN SKLVTVWGGFS KWY ELFKDQQILDAV
Sbjct: 1   MKKLSFSTVMLWLGLIFLYAPMFILIFYSFNASKLVTVWGGFSAKWYVELFKDQQILDAV 60

Query: 61  WTSLRIAFYSSTMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLF 120
           WTSL IAF S++MAV++GTMAAFVMTRF+RSWAKL+LSNMITAPLVMPEVITGLSLLLLF
Sbjct: 61  WTSLEIAFLSASMAVVLGTMAAFVMTRFRRSWAKLSLSNMITAPLVMPEVITGLSLLLLF 120

Query: 121 VHMADLLGWPKERGMVTVWIAHSTFCAAYVAVVVSSRLRELDRSIEEAAMDLGATPLKTF 180
           VHMADL+GWP ERG +T+W+AHSTFCAAYVAVVVSSRLRELD SIEEAAMDLGATPLKTF
Sbjct: 121 VHMADLIGWPAERGRLTIWLAHSTFCAAYVAVVVSSRLRELDMSIEEAAMDLGATPLKTF 180

Query: 181 FLITVPMISPALVAGWLLSFSLSLDDLVISSFASGPGATTLPMVVFSSVRLGVSPKINAL 240
           FLITVPMI+PAL AGWLLSFSLSLDDLVI+SFASGPGATTLPMVVFSSVRLGVSPKINAL
Sbjct: 181 FLITVPMIAPALTAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRLGVSPKINAL 240

Query: 241 ATLIILCVSLIAFLSWYMARRAEKRER 267
           ATLIIL VSLIAFLSWY ARRAEKR +
Sbjct: 241 ATLIILAVSLIAFLSWYFARRAEKRAK 267