Pairwise Alignments

Query, 271 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 266 a.a., ABC transporter permease subunit from Rhodopseudomonas palustris CGA009

 Score =  281 bits (720), Expect = 8e-81
 Identities = 145/251 (57%), Positives = 186/251 (74%), Gaps = 6/251 (2%)

Query: 1   MKKLSFSSVMLWFGLLFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFKDQQILDAV 60
           MK   F+ V L  GL FLY P++ILV+YSFN+S+LVTVWGG+S +WY E F+DQ +LDA 
Sbjct: 1   MKLSRFNLVSLTLGLAFLYLPIVILVVYSFNDSRLVTVWGGWSLRWYREFFQDQPMLDAA 60

Query: 61  WTSLRIAFYSSTMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLF 120
           W SLR+A  S+T A ++GT+AA  ++R      +   S M+ APLVMPEVITGLSLLLLF
Sbjct: 61  WMSLRVALTSATAAAVLGTLAAVALSRAGHFKGRTLFSGMLYAPLVMPEVITGLSLLLLF 120

Query: 121 VHMADLLGWPKERGMVTVWIAHSTFCAAYVAVVVSSRLRELDRSIEEAAMDLGATPLKTF 180
           V ++       ERG  TV IAH+T    +VAVVV SRL  LDRSIEEAAMDLG  P++ F
Sbjct: 121 VAIS------AERGFWTVVIAHTTLTMCFVAVVVQSRLHALDRSIEEAAMDLGCAPVEAF 174

Query: 181 FLITVPMISPALVAGWLLSFSLSLDDLVISSFASGPGATTLPMVVFSSVRLGVSPKINAL 240
              TVP+I PA+ AGW+L+F+LSLDDLVI+SF +GPG+TTLP+ ++S VRLGV P+INA+
Sbjct: 175 LRATVPLIWPAIAAGWMLAFALSLDDLVIASFTTGPGSTTLPIRIYSEVRLGVKPEINAI 234

Query: 241 ATLIILCVSLI 251
            TLII  V+++
Sbjct: 235 CTLIIAAVTVL 245