Pairwise Alignments

Query, 271 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 275 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  468 bits (1203), Expect = e-137
 Identities = 234/268 (87%), Positives = 253/268 (94%)

Query: 1   MKKLSFSSVMLWFGLLFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFKDQQILDAV 60
           ++KLSFS++MLW G+ FLYAPM ILV YSFNESKLVTVWGGFS KWYGELF+D QILDAV
Sbjct: 5   LRKLSFSTLMLWGGMFFLYAPMFILVFYSFNESKLVTVWGGFSAKWYGELFRDDQILDAV 64

Query: 61  WTSLRIAFYSSTMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLF 120
            TSL++AF++STMAVI+GTMAAFVMTRF RSW K+TLSNMITAPLVMPEVITGLSLLLLF
Sbjct: 65  ATSLKVAFFASTMAVILGTMAAFVMTRFARSWGKMTLSNMITAPLVMPEVITGLSLLLLF 124

Query: 121 VHMADLLGWPKERGMVTVWIAHSTFCAAYVAVVVSSRLRELDRSIEEAAMDLGATPLKTF 180
           VHMADLLGWP ERGM+TVWIAHSTFCAAYVAVVVSSRLRELD SIEEAA DLGATPLKTF
Sbjct: 125 VHMADLLGWPAERGMLTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAQDLGATPLKTF 184

Query: 181 FLITVPMISPALVAGWLLSFSLSLDDLVISSFASGPGATTLPMVVFSSVRLGVSPKINAL 240
           F ITVPMISPAL+AGWLLSFSLSLDDLVI+SFASGPGATTLPMVVFSSVR+GVSPKINAL
Sbjct: 185 FHITVPMISPALIAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRMGVSPKINAL 244

Query: 241 ATLIILCVSLIAFLSWYMARRAEKRERM 268
           ATLIIL VSLIAF+SWY+ARRA+KR RM
Sbjct: 245 ATLIILIVSLIAFISWYLARRADKRSRM 272