Pairwise Alignments

Query, 271 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 266 a.a., spermidine/putrescine ABC transporter membrane protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  189 bits (479), Expect = 7e-53
 Identities = 97/255 (38%), Positives = 155/255 (60%), Gaps = 7/255 (2%)

Query: 10  MLWFGLLFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFKDQQILDAVWTSLRIAFY 69
           ++W    FLY P+L++++YSFN+++  T W GF+ KWY  L  +  ++DA   SL +A  
Sbjct: 19  LVWLVYAFLYVPILVVIVYSFNDARYTTEWKGFTLKWYSALAANGPLVDAALNSLSVATL 78

Query: 70  SSTMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLFVHMADLLGW 129
           ++T+A ++GT+AA  + R++    K+ L   I    V P+++ G+SLL+ F+ M   LG+
Sbjct: 79  AATIATVLGTLAAICIRRYRFPGRKV-LHGCIYVLTVSPDIVMGISLLIFFIAMGVQLGF 137

Query: 130 PKERGMVTVWIAHSTFCAAYVAVVVSSRLRELDRSIEEAAMDLGATPLKTFFLITVPMIS 189
                  T+  AH T    +V V V +RL E D  + EAA DLGA+  + F  + +P+ +
Sbjct: 138 ------WTLLAAHVTLALPFVTVTVLARLAEFDEQLIEAARDLGASEWRAFRHVLLPLAA 191

Query: 190 PALVAGWLLSFSLSLDDLVISSFASGPGATTLPMVVFSSVRLGVSPKINALATLIILCVS 249
           PA+ AGWLLSF+LS+DD+++S F +GP    LP+ V+S VRLGV P INAL+ ++     
Sbjct: 192 PAVAAGWLLSFTLSMDDVLVSFFVTGPTFEVLPLRVYSMVRLGVKPDINALSAVMFTVTI 251

Query: 250 LIAFLSWYMARRAEK 264
           ++  L+  + R   K
Sbjct: 252 VLVLLAQTLTRTRRK 266