Pairwise Alignments

Query, 271 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 265 a.a., putrescine transport system permease protein potI (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  164 bits (415), Expect = 2e-45
 Identities = 95/272 (34%), Positives = 162/272 (59%), Gaps = 14/272 (5%)

Query: 1   MKKLSFSSVMLWFGLLFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFKD---QQIL 57
           M K  F+   LW  LL LY+P++I+VIYSF E+K++  W GFS K Y  LF       ++
Sbjct: 1   MVKKIFAQTYLWVLLLLLYSPIVIIVIYSFTEAKVLGNWTGFSTKLYSSLFNTGAHHSLM 60

Query: 58  DAVWTSLRIAFYSSTMAVIIGTMAAFVMTRFK-RSWAKLTLSNMITAPLVMPEVITGLSL 116
           +A+  ++ IA  ++T + ++G++AA  +   K RS   +   N I  P++  ++ITG+SL
Sbjct: 61  NALINTITIALLAATASTLLGSIAAIGIFNLKARSRKAIGFVNSI--PILNGDIITGISL 118

Query: 117 LLLFVHMADLLGWPKERGMVTVWIAHSTFCAAYVAVVVSSRLRELDRSIEEAAMDLGATP 176
            LLFV +    G+       TV +AH TFC  YV + V  RL++++ +I EAA+DLGATP
Sbjct: 119 FLLFVSLGITQGY------TTVVLAHITFCTPYVVLSVLPRLKQMNPNIYEAALDLGATP 172

Query: 177 LKTFFLITVPMISPALVAGWLLSFSLSLDDLVISSFASG-PGATTLPMVVFSSVRL-GVS 234
           ++    + +P I P +++G++L+ +LS+DD  ++ F  G  G  TL   +++  R  G++
Sbjct: 173 MQALRKVIIPEIRPGMISGFMLALTLSIDDFAVTVFTIGNQGLETLSTYIYADARKGGLT 232

Query: 235 PKINALATLIILCVSLIAFLSWYMARRAEKRE 266
           P++  L+ +I + V  +  +  Y A + +K+E
Sbjct: 233 PELRPLSAIIFVVVLALLIVINYRAGKTKKKE 264