Pairwise Alignments

Query, 271 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 303 a.a., putrescine/spermidine ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  312 bits (800), Expect = 5e-90
 Identities = 151/264 (57%), Positives = 203/264 (76%), Gaps = 1/264 (0%)

Query: 5   SFSSVMLWFGLLFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFKDQQILDAVWTSL 64
           + S+ +L FG LFLY P++ L++YSFNESKLVTVW GFS KWYG L +D ++L+A W SL
Sbjct: 7   TLSNSVLTFGFLFLYIPIISLIVYSFNESKLVTVWSGFSLKWYGALLQDGELLNAAWLSL 66

Query: 65  RIAFYSSTMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLFVHMA 124
           +I   ++  +V+IGT A FV+ RF R       + MI APLV+PEVI G+SLLLLFV + 
Sbjct: 67  KIGLLTACASVVIGTWAGFVLARFGRFRGFTLFAGMINAPLVIPEVIQGISLLLLFVALE 126

Query: 125 DLLGWPKERGMVTVWIAHSTFCAAYVAVVVSSRLRELDRSIEEAAMDLGATPLKTFFLIT 184
            +LGWPK RG+ T+WI H   C +YVA++V SR++EL+RS+EEAA+DLGATP K FFLIT
Sbjct: 127 QMLGWPKGRGLFTIWIGHVMLCVSYVAIIVQSRVKELNRSLEEAALDLGATPFKVFFLIT 186

Query: 185 VPMISPALVAGWLLSFSLSLDDLVISSFASGPGATTLPMVVFSSVRLGVSPKINALATLI 244
           +P+IS AL++GWLLSF+LS DDLV+S+F SGPG+TTLP+VVFS VRLG++P++NALAT+ 
Sbjct: 187 LPLISQALMSGWLLSFTLSFDDLVLSAFLSGPGSTTLPLVVFSRVRLGLNPEMNALATIF 246

Query: 245 ILCVSL-IAFLSWYMARRAEKRER 267
           I  V++ +  ++ +M  R  KR R
Sbjct: 247 ITTVTIGVIAVNRWMQLRERKRNR 270