Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 298 a.a., ABC-type spermidine/putrescine transport system, permease component I from Pseudomonas stutzeri RCH2

 Score =  400 bits (1027), Expect = e-116
 Identities = 194/290 (66%), Positives = 235/290 (81%)

Query: 12  GRFWTISFPYAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADDVLNIFLHLGNYL 71
           GR   I  P+ WL LFF LPFAIV KIS + A +AIPPY   F YAD  L + ++LGNY+
Sbjct: 9   GRRLVIGVPFLWLFLFFLLPFAIVLKISFAEADVAIPPYTDIFAYADQQLQVLINLGNYI 68

Query: 72  MLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLLLLVMLPSWTSF 131
            L +D LY  AYL SL++A  ST+ CL+IGYPMAYAIARA    QTV LLL+M+P+WT+ 
Sbjct: 69  FLSEDELYLAAYLGSLRIAFFSTLLCLLIGYPMAYAIARARKDLQTVFLLLIMMPTWTAI 128

Query: 132 LIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYLPFMILPLYATL 191
           LIRVYAWMGILS+ G++N+ L+ +G+I  PLQILNT+IAVYIG++Y+YLPFMILPLYA L
Sbjct: 129 LIRVYAWMGILSSNGLLNSLLLGMGLIDTPLQILNTDIAVYIGVVYSYLPFMILPLYANL 188

Query: 192 VKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEFVIPELLGGPDS 251
           VK D SL+EAASDLG+  + +FWKIT PLSK+G+IAG MLVFIP VGEFVIPELLGGP++
Sbjct: 189 VKHDPSLLEAASDLGARNLTSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPET 248

Query: 252 LMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARSLEKDL 301
           LMIGKVLWQEFFNNRDWPVAS+LA+VML +L+IPI LF+R QA+ LE  L
Sbjct: 249 LMIGKVLWQEFFNNRDWPVASALAVVMLAILLIPIILFNRNQAKELEGKL 298