Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 306 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  414 bits (1063), Expect = e-120
 Identities = 204/299 (68%), Positives = 242/299 (80%), Gaps = 2/299 (0%)

Query: 2   KIKSKLKWLK--GRFWTISFPYAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADD 59
           KIK   + +K  GR   I  P+ WL LFFALPF IV KIS + A +AIPPY   F YAD+
Sbjct: 5   KIKRAFERIKPNGRQMVIGVPFLWLFLFFALPFLIVLKISFAEADVAIPPYTEIFSYADE 64

Query: 60  VLNIFLHLGNYLMLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVL 119
            L + L+  NY +L  D LY +AYL SLKMA +ST+ CL+IGYPMAYAIA A    QTVL
Sbjct: 65  KLQMVLNFANYTLLSGDDLYVSAYLGSLKMAFISTLLCLLIGYPMAYAIASARKDLQTVL 124

Query: 120 LLLVMLPSWTSFLIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAY 179
           LLL+M+P+WT+ LIRVYAWMGILSN G++N  LMWLG+I  PLQILNTN+AVYIG++Y+Y
Sbjct: 125 LLLIMMPTWTAILIRVYAWMGILSNNGLLNAFLMWLGLIDAPLQILNTNLAVYIGVVYSY 184

Query: 180 LPFMILPLYATLVKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGE 239
           LPFMILPLYA LVK D SL+EAASDLGSS  N+FWKIT PLSK+GVIAG MLVFIP VGE
Sbjct: 185 LPFMILPLYANLVKHDTSLLEAASDLGSSTFNSFWKITVPLSKNGVIAGCMLVFIPVVGE 244

Query: 240 FVIPELLGGPDSLMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARSLE 298
           FVIPELLGGP++LMIG+VLWQEFFNNRDWPVAS+LA++ML++LI+PI LF+R QA+ LE
Sbjct: 245 FVIPELLGGPETLMIGRVLWQEFFNNRDWPVASALAVIMLLVLIVPIILFNRSQAKELE 303