Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 303 a.a., putrescine ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  333 bits (853), Expect = 4e-96
 Identities = 160/285 (56%), Positives = 213/285 (74%), Gaps = 5/285 (1%)

Query: 17  ISFPYAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADDVLNIFLHLG-----NYL 71
           I  PYAWLL FF +PF IVF+ISLS  A+A+PPY   F  A  +  I   LG     NY+
Sbjct: 14  IIIPYAWLLFFFLIPFFIVFRISLSQTAVAMPPYMPVFDLAGGLSGIMEKLGEFSLDNYV 73

Query: 72  MLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLLLLVMLPSWTSF 131
            L +D LY+ AY+SS+ +A +ST   L+IGYP+AY +A+AP   +  LL++V+LP WTSF
Sbjct: 74  WLTEDVLYFNAYVSSVVIAAISTFLTLLIGYPIAYGMAKAPRSLRPTLLMIVILPFWTSF 133

Query: 132 LIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYLPFMILPLYATL 191
           LIRVYAW+ IL   G++N  L  +G+I +PL ILNTN+A+YIGI+Y+YLPFM+LP+Y+ L
Sbjct: 134 LIRVYAWIAILKPEGLLNQVLSAVGLIDQPLIILNTNLAIYIGIVYSYLPFMVLPIYSAL 193

Query: 192 VKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEFVIPELLGGPDS 251
            K+D SL EAA DLG +    FW++TFPLS  GV+AG +LVFIPAVGEFVIP+LLGG ++
Sbjct: 194 EKMDHSLTEAAQDLGCTPAAAFWRVTFPLSLPGVVAGCLLVFIPAVGEFVIPDLLGGSET 253

Query: 252 LMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARS 296
           LMIGK LW EF +NRDWPV+S++AI++L++L+IPI  F   QA++
Sbjct: 254 LMIGKTLWSEFNSNRDWPVSSAVAIILLMILVIPIVYFQNIQAKA 298