Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 296 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  163 bits (412), Expect = 5e-45
 Identities = 82/233 (35%), Positives = 138/233 (59%), Gaps = 2/233 (0%)

Query: 69  NYLMLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLLLLVMLPSW 128
           +Y  +  +PL+     S++++A V T+  L++G+P+AY +AR        +   V +P W
Sbjct: 62  HYRRIFTEPLHLEVLFSTIEVAFVVTVAGLLLGFPVAYLMARLSRGLAMAVAACVFVPLW 121

Query: 129 TSFLIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYLPFMILPLY 188
           TS LIR YAW+ +L   GI+N  L   G+   PL+++ T  AV + + +  +PFMILP+Y
Sbjct: 122 TSVLIRSYAWVVLLQRNGIVNKLLADTGVTEGPLKLIYTQGAVILAMTHVLMPFMILPIY 181

Query: 189 ATLVKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEFVIPELLGG 248
           + L  L    + AA +LG+  I  F  +T PLS  G+ AGS++ F+ A+G ++ P L+GG
Sbjct: 182 SALRALPPDYVRAARNLGAGPIRAFVTVTLPLSLPGIFAGSVMCFVLALGFYITPALVGG 241

Query: 249 PDSLMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARSLEKDL 301
           P S+++  ++ Q+     DWP A++L+ V+L + ++ + +F R    SL K L
Sbjct: 242 PSSMLMATLIGQQTTVLLDWPFAAALSTVLLAVTLLFVLMFRR--TLSLSKGL 292