Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 330 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  351 bits (901), Expect = e-101
 Identities = 173/288 (60%), Positives = 213/288 (73%), Gaps = 1/288 (0%)

Query: 12  GRFWTISFPYAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADDV-LNIFLHLGNY 70
           GR   I  PY WLLLFF LPFAIV KIS +   + +PPY A   +  D  L + L L NY
Sbjct: 37  GRRLVILVPYVWLLLFFVLPFAIVLKISFAEFRVGVPPYTALIDFTQDAYLRLTLALSNY 96

Query: 71  LMLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLLLLVMLPSWTS 130
             +LDD +Y  AYL+SL++A +ST+  L+IGYPMAY IARAP   +T+LL LV+LP WTS
Sbjct: 97  KYMLDDEMYVIAYLNSLRIAGISTVLALLIGYPMAYGIARAPKGPRTILLFLVILPFWTS 156

Query: 131 FLIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYLPFMILPLYAT 190
           FLIRVYAWMGIL   G++N  L+W G+I +PL I+ T  AV+IGI+Y+YLPFM+LPLYAT
Sbjct: 157 FLIRVYAWMGILKGNGLLNTFLIWTGVIDQPLTIMGTEWAVFIGIVYSYLPFMVLPLYAT 216

Query: 191 LVKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEFVIPELLGGPD 250
           L KLD SL+EAA DLG      F  IT PLS  G+IAGSMLVFIP+VGEFVIPELLGG D
Sbjct: 217 LEKLDPSLLEAAHDLGCRPWKAFLTITLPLSVPGIIAGSMLVFIPSVGEFVIPELLGGAD 276

Query: 251 SLMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARSLE 298
           + MIG+VLW EFF NRDWPVAS++A+ ML++L++PI +F   QA+  E
Sbjct: 277 TFMIGRVLWNEFFLNRDWPVASAVAVAMLLMLVVPIMIFQNIQAKQAE 324