Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 301 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  482 bits (1241), Expect = e-141
 Identities = 236/301 (78%), Positives = 263/301 (87%)

Query: 1   MKIKSKLKWLKGRFWTISFPYAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADDV 60
           MK   K +  KG+ WTI  PY WLL+FFALPFAIV KISLST A+AIPPYEA +QYAD+ 
Sbjct: 1   MKKSLKFRLPKGQCWTIGVPYFWLLMFFALPFAIVLKISLSTPAVAIPPYEALYQYADES 60

Query: 61  LNIFLHLGNYLMLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLL 120
           L I L+LGNY+++ +D LY  AYL SLKMA V+TIGCL+IGYPMAYAIARAP + QTVL+
Sbjct: 61  LQIMLNLGNYILIFEDHLYINAYLGSLKMACVTTIGCLLIGYPMAYAIARAPKQHQTVLI 120

Query: 121 LLVMLPSWTSFLIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYL 180
           LLVMLPSWTSFLIRVYAWMGILSN G+INN LMWLG+ISEP+Q+LNTN AVYIGIIY YL
Sbjct: 121 LLVMLPSWTSFLIRVYAWMGILSNNGVINNLLMWLGVISEPIQMLNTNFAVYIGIIYTYL 180

Query: 181 PFMILPLYATLVKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEF 240
           PFMILPLYA L +LD SL+EAA+DLGS  +NTFWK+T PLSK GVIAGSMLVFIP VGEF
Sbjct: 181 PFMILPLYANLSQLDGSLLEAAADLGSRSLNTFWKVTLPLSKGGVIAGSMLVFIPVVGEF 240

Query: 241 VIPELLGGPDSLMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARSLEKD 300
           VIPELLGGPDSLMIGKVLWQEFFNNRDWPVASSLAIVML LLIIPITLFHRYQ+RS+EK 
Sbjct: 241 VIPELLGGPDSLMIGKVLWQEFFNNRDWPVASSLAIVMLALLIIPITLFHRYQSRSMEKT 300

Query: 301 L 301
           +
Sbjct: 301 I 301