Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 281 a.a., spermidine/putrescine ABC transporter, permease protein PotB from Marinobacter adhaerens HP15

 Score =  201 bits (511), Expect = 2e-56
 Identities = 108/280 (38%), Positives = 170/280 (60%), Gaps = 14/280 (5%)

Query: 21  YAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADDVLNIFLHLGNYLMLLDDPLYY 80
           + WLL     P  +V   S+ T                  L++ L+L  Y  L D PLY 
Sbjct: 14  WGWLLFLVLAPNLLVVGASVMTRDPV------------SFLSLPLNLDAYRQLFD-PLYL 60

Query: 81  TAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLLLLVMLPSWTSFLIRVYAWMG 140
             +L SL MA ++T+ CL+IGYP A+A+++   + Q VL+ L+++P WT+ L+R YA   
Sbjct: 61  DVFLHSLYMAAMTTLVCLLIGYPFAWALSKVGKQRQLVLIFLLIVPFWTNSLVRTYALKL 120

Query: 141 ILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYLPFMILPLYATLVKLDMSLIE 200
           IL+  G++N++LM +G+I EPLQ+L T  AV IG++Y  LPFMILPLY+    L   L+ 
Sbjct: 121 ILATNGLLNSALMSIGLIDEPLQLLYTEGAVIIGLVYLLLPFMILPLYSVFEDLKQELLL 180

Query: 201 AASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEFVIPELLGGPDSLMIGKVLWQ 260
           A+ DLG+ R++TF  +  PL+  GV+AG MLV +PA+G F +P++LGG  +L++G V+  
Sbjct: 181 ASHDLGAGRLSTFVHVIVPLTLPGVLAGVMLVLLPAMGLFFVPDILGGSRNLLVGNVIKN 240

Query: 261 EFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARSLEKD 300
           +F + R+WP  ++ +IV+ V +   +   HR   R + ++
Sbjct: 241 QFLDARNWPFGAAASIVLTVTMAF-LMFAHRLSKRRIGEE 279