Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 320 a.a., putrescine ABC transporter permease PotH from Pantoea sp. MT58

 Score =  382 bits (982), Expect = e-111
 Identities = 177/293 (60%), Positives = 230/293 (78%)

Query: 5   SKLKWLKGRFWTISFPYAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADDVLNIF 64
           +++K   GR   I+ PY WL+L F LPF  V KIS +  A AIPPY     +ADD  +I 
Sbjct: 24  TRVKMQHGRKLVIALPYVWLVLLFLLPFLTVLKISFADIARAIPPYTELVSWADDQFSIV 83

Query: 65  LHLGNYLMLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLLLLVM 124
           L+ GNYL L DDPLY  AYL SLK+A +ST+ CL+IGYP+A+A+A +    +T+LLLLV+
Sbjct: 84  LNFGNYLTLTDDPLYIDAYLQSLKVAAISTVICLLIGYPLAWAVAHSKPSMRTILLLLVI 143

Query: 125 LPSWTSFLIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYLPFMI 184
           LPSWTSFL+RVYAWMG+L+N GI+N  L+WLG+I  PL IL TN AVYIGI+Y YLPFM+
Sbjct: 144 LPSWTSFLVRVYAWMGLLNNNGILNRFLLWLGVIDHPLVILYTNTAVYIGIVYCYLPFMV 203

Query: 185 LPLYATLVKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEFVIPE 244
           LP+Y  L ++D SL+EA+ DLG+  + TF+ +  PL+K G+IAGSMLVFIPAVGE+VIPE
Sbjct: 204 LPIYTALTRIDYSLVEASLDLGARPLKTFFSVIVPLTKGGIIAGSMLVFIPAVGEYVIPE 263

Query: 245 LLGGPDSLMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARSL 297
           LLGGPDS+MIG++LWQEFFNNRDWPVAS+LA+++L++LI+PI  FH++Q R +
Sbjct: 264 LLGGPDSIMIGRILWQEFFNNRDWPVASALAVIILLILILPIIWFHKHQNREM 316