Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 309 a.a., putrescine/spermidine ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  340 bits (871), Expect = 3e-98
 Identities = 156/290 (53%), Positives = 221/290 (76%)

Query: 10  LKGRFWTISFPYAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADDVLNIFLHLGN 69
           L GR   ++ P+ WLLLFF +PF +V KIS +   + IPPY     +AD  ++I L L +
Sbjct: 18  LSGRTAVVAGPFIWLLLFFLVPFLLVVKISFADLQLGIPPYTELTNFADGAIHITLDLSH 77

Query: 70  YLMLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLLLLVMLPSWT 129
           Y  LL D LY+  Y++S+ +A +ST+ CL+IGYPMAY IAR+    + +L++ VMLP WT
Sbjct: 78  YAFLLTDSLYFATYVNSVVVAAISTLLCLLIGYPMAYYIARSNPGSRNLLMMAVMLPFWT 137

Query: 130 SFLIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYLPFMILPLYA 189
           SFLIRVYAW+GIL N G++NN LM +G+I  P+++ +TN AVYIG++Y+YLPF+++PLYA
Sbjct: 138 SFLIRVYAWIGILKNNGLLNNFLMSIGLIHSPIELYHTNTAVYIGMVYSYLPFLVMPLYA 197

Query: 190 TLVKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEFVIPELLGGP 249
            LVK+DM+L+EAA DLG+     FW+IT PLSK+G+IAG +LVFIPAVGE+VIPELLGG 
Sbjct: 198 HLVKMDMTLLEAAYDLGAKPWKAFWQITLPLSKNGIIAGCLLVFIPAVGEYVIPELLGGA 257

Query: 250 DSLMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARSLEK 299
           ++LMIG+V+W EFF+N DWP+AS++   M++LL++P+  F   QA+++E+
Sbjct: 258 NTLMIGRVMWNEFFDNADWPMASAVTCAMVLLLLVPMAFFQYAQAKAMEE 307