Pairwise Alignments

Query, 400 a.a., ISSod4, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 405 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  462 bits (1189), Expect = e-135
 Identities = 211/389 (54%), Positives = 294/389 (75%), Gaps = 2/389 (0%)

Query: 8   EQALKDLQSGKSLTGKDSILGPLIKQLTEAALQAELEQHLAHDPQ--PNRKNGKTPKTIK 65
           ++AL  L+SG+SLTGKD   GPL+K+  EAAL  E+  HL    +   N++NG+  K +K
Sbjct: 13  DKALSQLRSGESLTGKDGAFGPLLKEFLEAALDGEMSSHLDDSERLKGNKRNGRGSKRVK 72

Query: 66  HPSGNFELDAPRDRNGTFEPQLIKKNQTTLTDEIERKVLSMFSIGMSYRDINQHVEDMYG 125
             +G  ++  P+DR+ +F P+++KK +T L D +  K++S++ +G+S RDI+ H+E+MY 
Sbjct: 73  TMAGEIDIVTPQDRHSSFSPEILKKRETILADNMSSKIISLYGMGLSLRDISSHIEEMYD 132

Query: 126 LNVSNATVSAITDKLIPELKAWQQRPLDSHYPIVWLDAIHYKVKEDGRYVSKAVYTLLAL 185
           + +S+ T+S I ++++P++K WQ RPL+S Y IVWLDA+HYKVK+ GR  S+AVY +LA+
Sbjct: 133 VEISHNTLSEIIERIVPKVKEWQSRPLESMYTIVWLDAMHYKVKDGGRTESRAVYNVLAV 192

Query: 186 NMKGKKEILGLHLSENEGANYWLSVLTDLNNRGVKDILIACVDGLTGFPEAIASIFPHTE 245
           N  G KE++G+++SE+EGAN+WLSVLTDL  RG+KD+LIAC+D LTGF EAI++IFP   
Sbjct: 193 NKDGHKELIGMYVSESEGANFWLSVLTDLKARGMKDVLIACIDNLTGFAEAISTIFPEVI 252

Query: 246 TQLCVIHQIRNSMKYVASKNQKAFMADLKPVYRAVSKEAAEMALDELEAKWGDAYPLVIN 305
            Q CVIHQIRNS+KY+ASK+QK FMADLK VY+A +K+ AE+ LD+L+ KWG  YP+V+ 
Sbjct: 253 IQNCVIHQIRNSLKYIASKDQKEFMADLKTVYQAPNKDLAELNLDKLQDKWGKKYPVVLE 312

Query: 306 SWRRKWHNLSHYFKYPEHIRKVIYTTNAVEAVHRQFRKLTKTKGAFPNENSLLKLLYAGI 365
           SWRR W NLS YF Y EHIR++IYTTNAVE  HRQ RK+TKTKG FPN+ +L+KL+Y  +
Sbjct: 313 SWRRNWDNLSAYFAYDEHIRRLIYTTNAVEGFHRQVRKVTKTKGVFPNDMALMKLIYLAV 372

Query: 366 LNASDKWTMPIHNWSLCLSQLAIYFEGRL 394
           +N S KWT P+ NW+L   QL I F  R+
Sbjct: 373 MNISKKWTQPLQNWALTAGQLRIKFGERM 401