Pairwise Alignments

Query, 182 a.a., transcriptional regulator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 203 a.a., Helix-turn-helix motif protein from Pseudomonas syringae pv. syringae B728a

 Score =  174 bits (440), Expect = 1e-48
 Identities = 91/183 (49%), Positives = 123/183 (67%), Gaps = 2/183 (1%)

Query: 1   MDIGASLRTVRKMKGLSQRELAKRAGVTNSTISMIEKNSVSPSVSSLKKVLSGIPMSLVD 60
           MD GA L+ VR+   LSQRELA+R+GVTN+TIS+IE+N VSPS+SSLKK+L GIPM+L D
Sbjct: 22  MDTGARLKLVRESYKLSQRELARRSGVTNATISLIEQNRVSPSISSLKKLLEGIPMTLAD 81

Query: 61  FFSIEASSECEQKVVYRSDELLNIGTGPLEFKLIGRDYPNRAMSVMSETYPPGSDTGEEM 120
           FF+ +     +Q  V+R+ +  ++G       L+G   P+R M  + E Y PG+D+G+E 
Sbjct: 82  FFTFDQPPGQDQ-YVFRAGDQPDLGRNGARLLLVGATLPSRQMRFLREQYAPGADSGDEP 140

Query: 121 LKH-EGEEAAMVVEGRFELTVGDEVYILEAGDSYYFNSELPHRFRNPFDEPCRLVSATTP 179
           + H EGEE  +V  G  ELT+  +V IL  GD YYF + LPHRFRN   +   ++SA TP
Sbjct: 141 IVHSEGEECGLVTRGTVELTIDGQVNILGPGDGYYFPTTLPHRFRNIGHDEAEIISANTP 200

Query: 180 ANF 182
           ANF
Sbjct: 201 ANF 203