Pairwise Alignments

Query, 182 a.a., transcriptional regulator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 189 a.a., DNA-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 79.0 bits (193), Expect = 5e-20
 Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 9/178 (5%)

Query: 3   IGASLRTVRKMKGLSQRELAKRAGVTNSTISMIEKNSVSPSVSSLKKVLSGIPMSLVDFF 62
           +GA +R  R+ +G+S+ +L++ AG+T   I+ +E++++ PS+  L+KV   + + L  F 
Sbjct: 6   LGARVRKYREDRGMSREQLSEAAGLTVEFIAALEEDNLYPSIGPLQKVARALNVRLGTFM 65

Query: 63  SIEASSECEQKVVYRSDELLNIGT-------GPLEFKLIGRDYPNRAMSVMSETYPPGSD 115
             E + +    V  R D   ++             F  +G+   +R M        P  +
Sbjct: 66  DDEVTKD--PIVARRGDREADLTMQKARNKRAAFRFHSLGKGKSDRNMEPFFIEICPEPE 123

Query: 116 TGEEMLKHEGEEAAMVVEGRFELTVGDEVYILEAGDSYYFNSELPHRFRNPFDEPCRL 173
              ++  H+GEE  +V +GR  +  G E  +LE GD+ Y+NS +PH      D+P  +
Sbjct: 124 EDRKLSSHQGEEFILVTKGRVRVVYGKEEQVLEPGDTIYYNSIVPHYVGAEGDDPAEI 181