Pairwise Alignments

Query, 435 a.a., hypothetical oxidoreductase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 428 a.a., FAD dependent oxidoreductase (RefSeq) from Shewanella sp. ANA-3

 Score =  358 bits (920), Expect = e-103
 Identities = 178/423 (42%), Positives = 264/423 (62%), Gaps = 5/423 (1%)

Query: 13  PH--SYYLDTAKEIYAHPQLEGSITADVCIVGGGFSGINTAIELRQRGLSVVLLEAKRMG 70
           PH  SYY  +A +     +L+ SI ADVC++G G++G++ A+ L + G SVV+LEA R+G
Sbjct: 5   PHTGSYYAASANDKVERARLQESIEADVCVIGAGYTGLSAALHLLESGFSVVVLEAARIG 64

Query: 71  WGASGRNGGELIRGIGHDPAQFINEIGQEGVSAIQQMGFEAVDIVRNRIQTHQIDCDLQM 130
           WGASGRNGG+++     D       +G+E      QM FE   I+R RI  + IDCDL+ 
Sbjct: 65  WGASGRNGGQIVNSYSRDIDTIEKTVGKEQAKLFGQMAFEGGRIIRERIAKYNIDCDLKD 124

Query: 131 GYCDLAVKPRHMIELQEEFESLKSLGYKHEIKLLAQSQLGNVIGSDFYQGALVDMGSGHL 190
           G    A+  + M  L+ + +  +S G+  +++LL  + + +V+ ++ Y G ++D   GH+
Sbjct: 125 GGVFAAMNEKQMGHLRHQKQLWESHGHVGKLELLDANSIRSVVNTERYVGGMLDKSGGHI 184

Query: 191 HPLNLALGEARVARELGAQLFEYSAAEKIIQGDKPKVLTAKGEVTCQYLVLAGNAYIGHK 250
           HPLNLALGEAR    LG ++FE SA  ++ +GD P V TAKG V  +++V+AGNAY+G K
Sbjct: 185 HPLNLALGEARAVESLGGKIFEDSAVLRVDEGDSPVVHTAKGSVKAKFVVVAGNAYLG-K 243

Query: 251 LNSYIGGKVLPAGSYLLATEPLTQQQCKNIIPQNMAFADMRIALDYFHLSADRRLLFGGL 310
           L   +  K +P G+ ++ TEPL ++   +++PQ+    D    LDYF LS D+RL++GG 
Sbjct: 244 LMPELQAKSMPCGTQVITTEPLDEELAASLLPQDYCVEDCNYLLDYFRLSGDKRLIYGGG 303

Query: 311 CTYSGKDPKDIEAALRPNLEKVFPQLKGVRIDYEWGGMIGIGANRMPQIGRLPDASNIFF 370
             Y  +DP DIE+ + PN+ K FPQLKGV++DY W G   +  +R+PQ+GR+    NI++
Sbjct: 304 VVYGARDPADIESLIIPNMLKTFPQLKGVKVDYAWTGNFLLTLSRLPQVGRI--GKNIYY 361

Query: 371 AQAYAGHGVNATHMAAKLLAEAICQQAGHFDVFAKIKHMTFPGGPTFRSPMLAAGMLYHR 430
           +Q  +GHGV  TH+A KL+AE +  QA  FD FA + H  FPGG   R P  A G  Y+ 
Sbjct: 362 SQGCSGHGVTYTHLAGKLIAEMLNGQATRFDAFAALPHYPFPGGHALRVPFSALGAWYYS 421

Query: 431 FKD 433
            +D
Sbjct: 422 LRD 424