Pairwise Alignments

Query, 301 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 296 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 41/148 (27%), Positives = 79/148 (53%), Gaps = 2/148 (1%)

Query: 1   MLELHWLKTFVTLAECKHFGKAAAALHMTQPNVSLHIKQLEQNTRVKLIERNPFR--LTQ 58
           M+E+  L+ FVT+AE + F  AA  LH+ QP +S+ IK+ EQ   V L +R+  +  LT 
Sbjct: 7   MMEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTH 66

Query: 59  AGFRLLESSQKTLMELQVCQADLNAINDLSQGTLTIAASDIISRLLLIQPFQLFKAEFPG 118
            G  LLE +++ L ++   Q  ++ +  + +G + + A  ++      Q    FK+ FP 
Sbjct: 67  EGEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPN 126

Query: 119 IDFSLLNTTSFQASELVTNAEADLGFVI 146
           +  +++   +     ++ + E D+G ++
Sbjct: 127 LKMTVIEAGTQSIRRMLLSGELDIGVIL 154