Pairwise Alignments

Query, 301 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 302 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 80/306 (26%), Positives = 127/306 (41%), Gaps = 22/306 (7%)

Query: 3   ELHWLKTFVTLAECKHFGKAAAALHMTQPNVSLHIKQLEQNTRVKLIERNPFR--LTQAG 60
           +L+ L+ F  + E   F KAA  + +TQP +S  I++LE    VKL ER   R  LT  G
Sbjct: 6   DLNDLQAFRAVVENGSFRKAAETVQITQPALSRRIEKLESALNVKLFERTTRRVSLTTVG 65

Query: 61  FRLLESSQKTLMELQVCQADLNAINDLSQGTLTIAASDIISRLLLIQPFQLFKAEFPGID 120
              L   ++ L +L      +  +     G++TIA     +   + Q    F   FP I 
Sbjct: 66  RAFLPQVERILDDLDSALMTIEGVGSTRMGSVTIACVPSAAYYFMPQVISAFHRLFPKIR 125

Query: 121 FSLLNTTSFQASELVTNAEADLGFVIAQKESQPLHFTELQQIKW---CALGNNLAL---- 173
             +++ ++ + +  V   EAD G   +   +  + F  L Q ++   C   + LA     
Sbjct: 126 IRVMDASANEVNSAVALGEADFGVSFSGNLAPEVDFELLLQERYVMACRRDHPLATCESV 185

Query: 174 -WQQSQGRDDMPLAEQPTLILLGHDTRTRELLDPALPSLNLPRYRIMEVGSVDAQIDWAE 232
            W++    D          I L   +  R +LD AL      +  I E   V   I   E
Sbjct: 186 SWEEMYRHD---------YIALDITSGNRLVLDQALAPSRPHKESICETRHVTTMIGLVE 236

Query: 233 AGFGVAIVPEFSIYTKTNLKSKITPL--PQFPSTSLGYIVRQNQILSKAIKQLLHWVNQE 290
           AG GVA VP  ++    +      PL  P+    ++G I R+ + L+ A  +L   V + 
Sbjct: 237 AGLGVAAVPSIAMPMTAHPFLVSVPLVAPEV-IRNVGLIKRRGRTLTPAALELEQLVRKM 295

Query: 291 IIRIQG 296
             R  G
Sbjct: 296 PSRSAG 301