Pairwise Alignments

Query, 250 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 311 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 55/209 (26%), Positives = 105/209 (50%), Gaps = 9/209 (4%)

Query: 1   MRVQEVVSRSDASLKQVADVIGQDAAISARIIKVANSALYS-RGIPAESINNAVARIGLI 59
           +++Q +      S+  VAD + +D  +SA +I+VANS +++ R I    I  AV+R+G++
Sbjct: 52  LKIQRLCLAESTSISDVADCLIEDPGLSAIVIRVANSVVFNRRNITCTDIVTAVSRLGIL 111

Query: 60  QIKSIATSVAMEQLFISTN--EMVWEVMDEVWRTSIDVTAAACAMLQMY---NKRRPSQL 114
           +++ I T+ A+EQL  S N  +    ++ +    S ++ A    + Q +   + ++   L
Sbjct: 112 RVRDIVTAQAIEQLKYSVNLSKECNRILLKSATISREMGATMLLVTQTFKCVDAKKYQYL 171

Query: 115 NLDTLTLAGLVHNIGALPVLTEAEAHPELFTSIEQLRSL--VRKMQGPLGRAVLKSWDFA 172
            L+   L GL+ +IG   ++ E   + +    ++   +L   +    P+ + VL+ W F 
Sbjct: 172 ELEKALLVGLLADIGIFCLVNEYHLYLQNGNYLDPTIALKIFQSQCSPISQLVLRHWGFD 231

Query: 173 PEVMEVVERWADLPYLPDHVTYLDFIRAA 201
            + +EV     +L      VTYLD  R A
Sbjct: 232 HDFLEVACN-TELVTERQEVTYLDIARIA 259