Pairwise Alignments

Query, 250 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 280 a.a., putative signal transduction protein (RefSeq) from Shewanella loihica PV-4

 Score =  389 bits (999), Expect = e-113
 Identities = 200/251 (79%), Positives = 223/251 (88%), Gaps = 1/251 (0%)

Query: 1   MRVQEVVSRSDASLKQVADVIGQDAAISARIIKVANSALYSRGIPAESINNAVARIGLIQ 60
           MRVQEVVSR D+S KQVA++IGQDAAISAR+IKVANSA+YSRGI AE+IN AV RIGL Q
Sbjct: 30  MRVQEVVSRPDSSPKQVAEIIGQDAAISARMIKVANSAMYSRGIKAENINAAVTRIGLTQ 89

Query: 61  IKSIATSVAMEQLFISTNEMVWEVMDEVWRTSIDVTAAACAMLQMYNK-RRPSQLNLDTL 119
           IK+IATSVAMEQLFISTNEMVWEVMDEVWR SI+VT+AACA+L  Y+K  +   LN DTL
Sbjct: 90  IKAIATSVAMEQLFISTNEMVWEVMDEVWRASIEVTSAACALLLKYSKTHKGCGLNYDTL 149

Query: 120 TLAGLVHNIGALPVLTEAEAHPELFTSIEQLRSLVRKMQGPLGRAVLKSWDFAPEVMEVV 179
           TLA LVHNIGALPVLTEAEA+P LFTSIEQLR+LVRKMQGPLGRAVLKSWDF+PEV EVV
Sbjct: 150 TLASLVHNIGALPVLTEAEANPHLFTSIEQLRALVRKMQGPLGRAVLKSWDFSPEVTEVV 209

Query: 180 ERWADLPYLPDHVTYLDFIRAAAFYTGELRAGADFEQRMDVFVGRGLPVSANDLASDEFM 239
           ERWADLPYLP+ VTYLDF+RAAAFYTGELRAG D E+R+DVF+ RGLPVS   L SDEF+
Sbjct: 210 ERWADLPYLPEQVTYLDFVRAAAFYTGELRAGHDLEERLDVFLQRGLPVSPEYLGSDEFL 269

Query: 240 DKFHSIKESYQ 250
           D +HSIK SY+
Sbjct: 270 DNYHSIKLSYE 280