Pairwise Alignments

Query, 455 a.a., peptidase, U32 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 457 a.a., Collagenase and related proteases from Pseudomonas stutzeri RCH2

 Score =  672 bits (1735), Expect = 0.0
 Identities = 324/454 (71%), Positives = 391/454 (86%), Gaps = 8/454 (1%)

Query: 2   FKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNDFKMENLATGIEEAHALGKK 61
           ++ ELLSPAGTLK+MRYAFAYGADAVYAGQPRYSLRVRNN+F   NL  GI+EAHALGK+
Sbjct: 5   YRTELLSPAGTLKSMRYAFAYGADAVYAGQPRYSLRVRNNEFDHANLKLGIDEAHALGKQ 64

Query: 62  LYVVSNIAPHNAKLKTYIKDMEPVVAMKPDALIMSDPGLIMMVREAFPEQVVHLSVQANA 121
            YVV NIAPHNAKLKT+IKD+EPVVAM PDALIMSDPGLIM+VR+ FP+  +HLSVQANA
Sbjct: 65  FYVVVNIAPHNAKLKTFIKDLEPVVAMGPDALIMSDPGLIMLVRQHFPQMTIHLSVQANA 124

Query: 122 INWASVKFWQTQGIKRVILSRELSLDEIEEIRQRCPDIELEVFVHGALCMAYSGRCLLSG 181
           +NWA+VKFW++QG+ RVILSRELSL+EI EIR++ P +ELEVFVHGALCMAYSGRCLLSG
Sbjct: 125 VNWATVKFWESQGVSRVILSRELSLEEIGEIREQVPGMELEVFVHGALCMAYSGRCLLSG 184

Query: 182 YINKRDPNQGTCTNACRWKYDVHEAQQTDSGDI------IATPNAVQIETPTTLGAGAPT 235
           YINKRDPNQG+CTNACRW+Y  HEA++ + GDI      IA   A  + +  TLG GAPT
Sbjct: 185 YINKRDPNQGSCTNACRWEYKTHEAKENEIGDIVHKYEPIAVQPAEPVRSEPTLGVGAPT 244

Query: 236 EQIFLLQEANRPGEYMPAFEDEHGTYIMNSKDLRAIQHVERLAKMGIDSLKIEGRTKSFY 295
           +++FLL++++RPGE+M AFEDEHGTYIMNSKDLRA+QHVERL +MG+ SLKIEGRTKS Y
Sbjct: 245 DEVFLLEDSSRPGEFMSAFEDEHGTYIMNSKDLRAVQHVERLVQMGVHSLKIEGRTKSHY 304

Query: 296 YVARTAQLYRQAIDDAASGKSFDRSLMNQLEGLAHRGYTEGFLRRHVHDEYQNYDYGYSV 355
           YVARTAQ+YR+AIDDA +G+ FD+SLM+ LE LAHRGYTEGFLRRHVHDEYQNY+ G+S+
Sbjct: 305 YVARTAQVYRKAIDDALAGRPFDKSLMDTLESLAHRGYTEGFLRRHVHDEYQNYERGFSL 364

Query: 356 SDTQQFVGELTGKRNLAGLAEIEVKNKFSVGDSVELMTPQGNISLTIEQLENRKAEAVEA 415
           S+ QQFVGELTG+R   GLAE+ VKN+F+VGD +ELMTPQGN++L +EQLEN++ EA+E 
Sbjct: 365 SERQQFVGELTGERR-NGLAEVTVKNRFAVGDKLELMTPQGNLNLRLEQLENKRGEAIEV 423

Query: 416 GLGSGHSVYLPVPKEVDLNHGILLRNLPQGQDTR 449
             G GH+VYL VP++VDL + +L+R L +G  TR
Sbjct: 424 APGDGHTVYLAVPEDVDLRYALLMREL-EGSTTR 456