Pairwise Alignments

Query, 455 a.a., peptidase, U32 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 403 a.a., U32 family peptidase from Methanococcus maripaludis S2

 Score =  170 bits (430), Expect = 9e-47
 Identities = 136/455 (29%), Positives = 214/455 (47%), Gaps = 74/455 (16%)

Query: 5   ELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNDFKMENLATGIEEAHALGKKLYV 64
           ELL+PA  L  +  AF  GAD+VY G    S+R    +F+   L  GI  AH   K++Y+
Sbjct: 3   ELLAPARDLSGLITAFNNGADSVYCGLKEMSMRATAKNFERNELIEGINFAHDADKRVYL 62

Query: 65  VSNIAPHNAKLKTYIKDMEPVVAMKPDALIMSDPGLIMMVREAFPEQVVHLSVQANAINW 124
            +N   +   +    + +E   + + DA+I++D G ++  +E   E  VH+SVQ N  N 
Sbjct: 63  CTNTVVYEDDILNLNEILEFAKSAEVDAIIVNDIGAMVTAKELGLE--VHVSVQNNITNS 120

Query: 125 ASVKFWQTQGIKRVILSRELSLDEIEEIRQRCP----DIELEVFVHGALCMAYSGRCLLS 180
            + +F+ ++  KRV+LSREL+L++I+ I++       D+ELE F+HGALC A SGRC LS
Sbjct: 121 KTAEFF-SKFAKRVVLSRELTLNQIKRIKENLKVNKVDLELEGFIHGALCTAMSGRCYLS 179

Query: 181 GYINKRDPNQGTCTNACRWKYDVHEAQQTDSGDIIATPNAVQIETPTTLGAGAPTEQIFL 240
            Y+  R+ N G C   CR  + +       + ++I+                        
Sbjct: 180 SYLFNRNANCGDCLQPCRRSWKLVNEHADGTHELIS------------------------ 215

Query: 241 LQEANRPGEYMPAFEDEHGTYIMNSKDLRAIQHVERLAKMGIDSLKIEGRTKSFYYVART 300
                             G Y+++ KDL  I+H+  +  +  D  KIEGR K+  YV R 
Sbjct: 216 -----------------EGKYLLSPKDLCMIEHIPEMIDV-FDCFKIEGRAKNVDYVMRA 257

Query: 301 AQLYRQAIDDAASGKSFDRSL---MNQLEGLAHRGYTEGFLRRHV---HDEYQNYDYGYS 354
            + YR+AID    G +++  L     +L+ + +R Y  GF  R +   HD    Y++  +
Sbjct: 258 TKTYREAIDSVVDG-TYEEKLPIFKKELDKIYNREYDTGFYFRDLTCNHD--LQYEFEGN 314

Query: 355 VSDTQQF-VGELTGKRNLAGLAEIEVKNKFSVGDSVELMTP-QGNISLTIEQLENRKAEA 412
           VS  ++  VG++        +AEI + +   VGDSV ++ P  G I   IE ++      
Sbjct: 315 VSPYKKIEVGKVVNYFKKVDVAEITLIDDLKVGDSVLIIGPTTGCIEEKIESMQVEGENI 374

Query: 413 VEAGLGSGHSVYLPVPKEVDLNHGILLRNLPQGQD 447
             A  G               N GI L NL +  D
Sbjct: 375 TTAKKGQ--------------NVGIKLENLVREND 395