Pairwise Alignments

Query, 143 a.a., acetoin utilization protein AcuB, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 238 a.a., CBS domain-containing protein from Dyella japonica UNC79MFTsu3.2

 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 15/139 (10%)

Query: 9   MCTRVVTVEMDDRLTVAKDIFEQANFHHLLVLDEY-KLEGVLSERDLLRAISPN------ 61
           M T V+    D  L  A     + +   L V+D +  + GVL+E DL+            
Sbjct: 7   MSTNVIAATPDMPLIDAMRTMLREHISGLPVMDAHGAVVGVLTEGDLMHRAEIETETGRT 66

Query: 62  --------LGNGAETSKDLETLQKRIHQVMTRNPVTVAPYVSLDVASRTLLEHNIGCLPV 113
                   LG G +  + + +  + +  VMTR+ +TV     L  A   +  H I  LPV
Sbjct: 67  HPAWLDFVLGPGRQAREFIASHARHVGDVMTRDVITVDAGAPLAEAIGLMERHAIKRLPV 126

Query: 114 LENGDLVGIVTWKDLLRAY 132
           L N  LVGI++  DLLRA+
Sbjct: 127 LRNQLLVGILSRADLLRAF 145



 Score = 35.0 bits (79), Expect = 8e-07
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 78  RIHQVMTRNPVTVAPYVSLDVASRTLLEHNIGCLPVLE-NGDLVGIVTWKDLL 129
           ++   M+ N +   P + L  A RT+L  +I  LPV++ +G +VG++T  DL+
Sbjct: 2   KVRHAMSTNVIAATPDMPLIDAMRTMLREHISGLPVMDAHGAVVGVLTEGDLM 54



 Score = 35.0 bits (79), Expect = 8e-07
 Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 6/129 (4%)

Query: 5   IADIMCTRVVTVEMDDRLTVAKDIFEQANFHHLLVLDEYKLEGVLSERDLLRAISPNLGN 64
           + D+M   V+TV+    L  A  + E+     L VL    L G+LS  DLLRA    L +
Sbjct: 92  VGDVMTRDVITVDAGAPLAEAIGLMERHAIKRLPVLRNQLLVGILSRADLLRAFVRALPD 151

Query: 65  GAETSKDLETLQKRIHQVMTRNPVTVAPYVSLDV------ASRTLLEHNIGCLPVLENGD 118
                     + +R+       P      V  DV          ++  ++ C  ++   +
Sbjct: 152 ATPDDLSDAAIARRLRAEFDARPWAPRGTVHADVHDGVVTLRGVIVNDDVRCALLVLAAN 211

Query: 119 LVGIVTWKD 127
           + G+V   D
Sbjct: 212 MAGVVRVDD 220