Pairwise Alignments

Query, 143 a.a., acetoin utilization protein AcuB, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 230 a.a., histidine kinase from Burkholderia phytofirmans PsJN

 Score = 46.6 bits (109), Expect = 2e-10
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 14/151 (9%)

Query: 6   ADIMCTRVVTVEMDDRLTVAKDIFEQANFHHLLVLD-EYKLEGVLSERDLLRAIS----- 59
           +D+M   V++V  D  +     IF         VLD +  L G++SE DLLR        
Sbjct: 4   SDVMTRSVISVHPDSTVREVAKIFVDNGISGAPVLDADGHLIGMISEGDLLRRNEIGTDE 63

Query: 60  -------PNLGNGAETSKD-LETLQKRIHQVMTRNPVTVAPYVSLDVASRTLLEHNIGCL 111
                   +L + +  ++D ++T   ++  VM+   VTV P   L   +  L    I  +
Sbjct: 64  RSRTSWLDHLWSASHEARDYIKTHATKVRDVMSTEVVTVQPGTPLGEVASILETRRIKRV 123

Query: 112 PVLENGDLVGIVTWKDLLRAYCAHNEVNQSE 142
           PV E G LVGIV+  +L++A  +  E   S+
Sbjct: 124 PVTEAGRLVGIVSRANLVQALASVPEQPTSD 154



 Score = 35.0 bits (79), Expect = 7e-07
 Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 5/66 (7%)

Query: 78  RIHQVMTRNPVTVAPYVSLDVASRTLLEHNIGCLPVLE-NGDLVGIVTWKDLLRAYCAHN 136
           R   VMTR+ ++V P  ++   ++  +++ I   PVL+ +G L+G+++  DLLR     N
Sbjct: 2   RASDVMTRSVISVHPDSTVREVAKIFVDNGISGAPVLDADGHLIGMISEGDLLR----RN 57

Query: 137 EVNQSE 142
           E+   E
Sbjct: 58  EIGTDE 63



 Score = 30.8 bits (68), Expect = 1e-05
 Identities = 16/55 (29%), Positives = 29/55 (52%)

Query: 5   IADIMCTRVVTVEMDDRLTVAKDIFEQANFHHLLVLDEYKLEGVLSERDLLRAIS 59
           + D+M T VVTV+    L     I E      + V +  +L G++S  +L++A++
Sbjct: 91  VRDVMSTEVVTVQPGTPLGEVASILETRRIKRVPVTEAGRLVGIVSRANLVQALA 145