Pairwise Alignments

Query, 829 a.a., trimethylamine-N-oxide reductase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 760 a.a., molybdopterin oxidoreductase (RefSeq) from Shewanella loihica PV-4

 Score =  111 bits (278), Expect = 1e-28
 Identities = 156/675 (23%), Positives = 271/675 (40%), Gaps = 89/675 (13%)

Query: 1   MNRRDFLKGL----ASTSFVALGGSSVLA----PLNALANTGLNENEWLTTGSHFGAFKI 52
           ++RR F+KG     AS +   L   S+ A    PL  +     +  E  +T     A  +
Sbjct: 4   LDRRTFIKGAGAGGASCALATLLPGSLAALEQKPLQGMGKEVASICEMCSTRCPISARVV 63

Query: 53  KRKNGMIAEVKAFDLDKYPTDMINGI-RGMVYNPSRVRYPMVRLDFLLKGHKSNTQQRGD 111
             KN  I    A            G    ++Y+P R+  P+ R+            +RG+
Sbjct: 64  DGKNVFIQGNSAAKSFGGKVCARGGAGHSLLYDPQRIVKPLRRVG-----------ERGE 112

Query: 112 FRFVRVTWDKALKLFKHSLDEVQTKYGPSGLHAGQTGWRATGQLHSSTSHMQRAVGMHGN 171
            ++  ++W +A K   H L++++ ++GP  +         +G L     H+ +A G    
Sbjct: 113 GKWEEISWQEAYKTIAHKLNDIKQQHGPEAVAFSSKSGSLSGHLF----HLGKAFGSPNT 168

Query: 172 FVKKIGDYSTGAGQTILPYVLGSTEVYAQGTSWPLILENSNTIVLWSNDPYKNLQVGWNA 231
           F       ST  G     YV+ +  ++  GT     L NS  I+ + ++ Y+ + +   +
Sbjct: 169 FTHA----STCPGG----YVIAAKAMF--GTKVKRDLSNSKYIINFGHNLYEGINM---S 215

Query: 232 ETHEAFAYLAQLKEKVKQGKIRVISIDPVVTKTQAYLGCEQLYVNPQTDVTLMLAIAHEM 291
           ET         +K ++ +G  +++  +P  +   A    E   + P TDVT+ LA+ H +
Sbjct: 216 ETR------GLMKAQMSKGA-KLVVFEPRFSIV-ADKADEWFAIRPGTDVTVALALCHVL 267

Query: 292 ITQKLHDEKFIQGYSLGFEEFVPYVMGTKDGIAKTPEWAAPICGVEPHIIRDLAKTLVKG 351
           I   L+D+ FI+ +  GF+ F       K+  A TPEWA  I  V    IR +A      
Sbjct: 268 IYDNLYDQAFIERHVEGFDAFA------KEVKAYTPEWAEGISDVPAKDIRRIAHEFAAK 321

Query: 352 RTQIMMGWCIQRQQHGEQPYWMAAVLAT--MIGQIGLPGGGISYGHHYSSIGVPATTAAA 409
               ++ +  +     E+     A+ A   +IG I   GG +  G    +    A    A
Sbjct: 322 APHAVVDFGHRATFTPEEFEMRRALFAANVLIGNIERKGG-LYLGKKAKTYNKFAGDKVA 380

Query: 410 PGAFPRNLDENQKPLFDSTDFKGASSTIPVARWIDAILEPGKTIDANGSKVVYPDIKMMI 469
           PG     ++   KP     D       +    W    +     +DA      Y  ++  +
Sbjct: 381 PGLGKPGVEGMPKPAAKRIDQVDEQYAM---MWSSGGIYQ-TILDATLKAKPY-QLRAWV 435

Query: 470 FSGNNPWNHHQDRNRMKQAFQKLECVVSIDVNWTATCRFSDIVLPACTTYERNDIDVYGA 529
            S  NP     DR  + +  +KLE VVS DV  + T  ++DI+LP  T  ER++     +
Sbjct: 436 MSRTNPMQTMTDRALVVETLKKLEFVVSCDVYISETAAYADIILPESTYLERDEEIADKS 495

Query: 530 YANRGILAMQKMVEPLFESLSDFEIFTRFAALLGKEKEYT-RNMSEMEWIETLYNECKAA 588
             +      Q++VE + ++   ++IF      +G  + +   NM  ++ ++         
Sbjct: 496 GKSPAYYVRQRVVETIGDTKPSWQIFKELGHEMGLGQYFPWENMESLQLLQV-------- 547

Query: 589 NAGKYEMPDFATFWKQGYVHFGEGELWTRH-----ADFRNDPEINP------------LG 631
                +M  F    ++GYV +G+  L  R      A  +  P   P              
Sbjct: 548 ---DRDMARFNEIKQKGYVSYGK-PLMLREPSMVAAFVKQYPNAKPTDDDGTYASAMSFK 603

Query: 632 TPSGLIEIFSRKIEQ 646
           TPSG IE+ S K+E+
Sbjct: 604 TPSGKIELSSDKVEK 618