Pairwise Alignments

Query, 359 a.a., periplasmic protein TorT (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 349 a.a., TMAO reductase system periplasmic protein TorT from Vibrio cholerae E7946 ATCC 55056

 Score =  186 bits (471), Expect = 1e-51
 Identities = 116/319 (36%), Positives = 182/319 (57%), Gaps = 15/319 (4%)

Query: 46  ALDYLPLTKAQQAWRLCVLVPHLKDAYWIGIDYGLIQHAKHLGVSLDLFEAGSYYHQDKQ 105
           AL  L    A  A +LC L PHLKD+YW+ ++YG+++ A+ L ++L + EAG Y +  KQ
Sbjct: 33  ALLLLSALPAAAAEKLCALYPHLKDSYWLSVNYGMVEEARKLNLNLRVMEAGGYPNHHKQ 92

Query: 106 LAQLRSCMSGDYDAILLGAVSPNL----LEHFPLPLSKPIIALVNKLN-SDQVLTH---- 156
             Q+  C+    DAILLG VSP L    L H+    S P+ A VN+L  ++Q   H    
Sbjct: 93  QQQIALCVRWGADAILLGTVSPELYQDDLAHYTR--SVPVFATVNQLRLNEQQQEHLKGE 150

Query: 157 IGVNWYQMGLRAGQFIKADAKVHTP-TQPTTLALLAGPENVGGTDLVEQGIRHALEGSNV 215
           +GV+WY MG  AG+++   A+ H   +    + +L GP + GGT  V QG+  A+  S+V
Sbjct: 151 VGVDWYWMGFYAGEYL---ARKHPKGSGEIKIVVLPGPASSGGTKPVLQGLEEAISHSDV 207

Query: 216 SISAIQHADNNRNLYRDQLQILLKAQQPNYILGSAVAIEAAVSTLKQKHMTQDIKLVSSY 275
            I+ I  ADN++ L R+ +Q  L+     Y++GSAVAIEAA+S L+  + +  I L+++Y
Sbjct: 208 RITEILWADNDKELQRNLIQQALEQPDVRYLVGSAVAIEAAISELRSLNKSDQIGLIATY 267

Query: 276 LSPAILRGLKRQKVLYSNDDLVVLQGKLAIDVAVKQLEGATPFGDIGPAIVGRTMSANTQ 335
           LS  + RGL R +V ++  D +V QG+L++  A   L          P I   T     +
Sbjct: 268 LSHGVYRGLLRGRVEFAPTDQMVEQGRLSVRQAAAFLRNKPYAIQQAPKIEALTPQHLER 327

Query: 336 SELSFSLAEADFYPLYQVR 354
             ++ SL+ +++ P++QV+
Sbjct: 328 KIIADSLSPSEYRPVFQVK 346