Pairwise Alignments

Query, 792 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 779 a.a., PilZ domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  270 bits (691), Expect = 2e-76
 Identities = 212/791 (26%), Positives = 374/791 (47%), Gaps = 37/791 (4%)

Query: 8   ALIEQLKPLLMEPNFQEIFQQLTADENNSTRFLLKMELSRLASPCTRIIDLRDKSELLCT 67
           +L+E+L P+    +   +  Q+T     S + L+KMEL+RL +PCT+ IDLR K +  C 
Sbjct: 8   SLVERLIPVYRSGDLDYLLSQMTEGHPPSAKLLVKMELNRLMAPCTKSIDLRGKVQGECR 67

Query: 68  EVMLGQQHHFLDEPAKHSLQEAMSLYRNKYTMGVYEYVIAAHQLRRQKLRQVVQQSDTVD 127
           E     + H+LD+ A +S Q+++  +   YT GV+E V       R   R V++Q   +D
Sbjct: 68  EYHFDGRQHWLDDVAFNSYQKSLKKF-GAYTEGVWEAV----NNTRNNFR-VMKQQGKLD 121

Query: 128 PEP-------FMVPGVVLGSYFNRAEERMNYSIRIAVSQPGRPEILGITIDLSIGGARIR 180
           P+        F V  V LG    R E R+  S +I +       + G+++DLS  GA+++
Sbjct: 122 PKTDQPKDTSFEVEPVKLGYDLKRQENRLKISSQIEIHLKNEQLVHGLSVDLSPSGAKLK 181

Query: 181 LSANHPFDLDKPLKVKLLELSEEYYYPDLQLGVDYHIV---DSETNGEFLWLRLKRIGGT 237
           + A   + L + ++V   +L++      L   +DY I+   +S  +    +LR+ ++  T
Sbjct: 182 VPAAFDYKLGEVIQVYFSDLNKTSNVVGLHKSIDYRILGVDESYDSDAIKFLRVLKLSDT 241

Query: 238 DALGEMLGNLIRGYKLRYKLDVNDVLVTASGLGFERHYLPHLPHLPLFLNQQTQSISHML 297
           D + +++   I+    + + D  D ++ A   G+E  YL H  +LPLF +     ++  L
Sbjct: 242 DVIEKVIEEAIQTNTQKARHDNQDKIIRARTRGYEHMYLKHTCNLPLFFSGNELKLA--L 299

Query: 298 LSRDNQQIVHYFQDENDISQLPAMLTSSRLSALFSHPENPDYSLFFTFTYNAQGCLYFYS 357
           L+ +N+ I  Y+ DE +   L  +    R++ L +       ++ + F +  Q    F+S
Sbjct: 300 LTENNRPIWQYWHDERNQQALGTLFKPERMAHLTAPGVRGSNNVLYAFKHEHQHKTLFFS 359

Query: 358 ATLAELKAKGLVPLFLGFASTKPSWRIFKLVSDKIYHAKGYRRATLPGDETQYSPLVEQQ 417
             + E   +    LF    + + SW+ F+L    ++      R TL     ++S  +  Q
Sbjct: 360 MLMPEATQEQR-KLFWHIGAKRDSWKAFRLF---VFELSDEERKTL----AEHSRELADQ 411

Query: 418 LSQFSHLLQLVDLTNEDERETYKAWQDDS-NANTLKAFGQQRLTAHQIKPIPMQFSERRQ 476
               +H   L ++++ +    Y   +  +  ++ L  F   R        I      RR+
Sbjct: 412 SRSLTHCGVLQEISDTEAAHDYLLVEKPNLPSSALNDFRHPRQVVGTPMGIYFDARSRRK 471

Query: 477 EARFAFKTLVNISQDNLKATGITLDISGRGMQLTLDNPTEFVVNKPLMICLPKLQTIAGK 536
           E R+ F T V +S D LK TG T+D+S RG+ L LD P +   N  + +   +L+     
Sbjct: 472 EPRYRFSTPVQVSIDALKVTGATVDLSKRGLSLLLDTPLDVKANDQVWVDYLELKLYDKS 531

Query: 537 TQLDNLPYRLVRTRKNGVTLHLAAVMGHTPHVGVEFLNKLIAHNKEKLEQLTENNSEANE 596
             LD  PY++VR    G  L L           + F N +I HN++KL  + E    +N 
Sbjct: 532 LPLDKAPYKVVRIGPEGRRLQLVIEENLQTLKTIAFFNSIIEHNQDKL-LIKEEILPSNA 590

Query: 597 LADGLKNILLRELHSVPYFVEKTTKSAQVTCLGVSTEHDEISSIFAAGSSDTLQYNLAPL 656
           L + L NILL ++ S P+FVEK   + +   +GV+       ++ A   S+  +  L P+
Sbjct: 591 LLESLHNILLDKMVSTPFFVEKVGSNLKPKVIGVNYPLPPHLALLAKLGSEN-RITLQPI 649

Query: 657 LKDGFCKRDILDPIRQMK---PQQDMDFIEVFIQLTRQSRGRFHLKCIPATEVGDAQAKV 713
            K G     +  P+++++   PQ    + EV++   +       ++    ++  D + ++
Sbjct: 650 FK-GHTNSLLATPMKRIEGAVPQ----YHEVYLSAVKYGTRIQSVESRLLSDFADTRERI 704

Query: 714 AFITQSKLTGRFMALRIYRGATEKPDMGYLRRELEYINIHANHRAKQLEEQLWRIIGVGE 773
            FI Q +  G F ALR+       P    LR +L  +   + H AK LE+++   +G GE
Sbjct: 705 RFIRQGQAMGEFYALRVSGVPVFAPITNLLRSDLTELAEISPHHAKSLEKEMLAQVGYGE 764

Query: 774 LLDITQEVELR 784
           L+DIT+EV +R
Sbjct: 765 LVDITEEVLIR 775