Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase J (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 209 a.a., 23S rRNA methyltransferase J (RefSeq) from Shewanella loihica PV-4

 Score =  380 bits (975), Expect = e-110
 Identities = 189/209 (90%), Positives = 197/209 (94%)

Query: 1   MSGKKRTASSNRWMLEHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGA 60
           MSGKKRTASS RWM EHFDDHYVKL+QKRGLRSRAAFK+EE+QQKD+LIRPGMTVVDLGA
Sbjct: 1   MSGKKRTASSTRWMQEHFDDHYVKLSQKRGLRSRAAFKIEEIQQKDKLIRPGMTVVDLGA 60

Query: 61  APGGWSQVAVKLVGDKGKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDV 120
           APGGWSQ+AVKL G+ GKVIACDILPMDPIVGVDFLQGDFREEKVL ALL RVG  KVDV
Sbjct: 61  APGGWSQIAVKLAGETGKVIACDILPMDPIVGVDFLQGDFREEKVLNALLERVGDAKVDV 120

Query: 121 VLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKE 180
           VLSDMAPNMSG+ GVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAV+E
Sbjct: 121 VLSDMAPNMSGTGGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVRE 180

Query: 181 AFKVVKTRKPDSSRARSREVYLVATGYKL 209
           AF  VKTRKPDSSR RSREVYLVATGYKL
Sbjct: 181 AFTTVKTRKPDSSRPRSREVYLVATGYKL 209