Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase J (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 210 a.a., 23S rRNA methylase from Dechlorosoma suillum PS

 Score =  226 bits (576), Expect = 2e-64
 Identities = 113/203 (55%), Positives = 148/203 (72%)

Query: 6   RTASSNRWMLEHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGAAPGGW 65
           R+ +S  W+ EH +DH+V  A+  G RSRA+FKL E+  KD+L++PG  VVDLGAAPGGW
Sbjct: 3   RSKTSKAWLQEHVNDHFVHRAKAEGWRSRASFKLLEIDDKDKLLKPGEVVVDLGAAPGGW 62

Query: 66  SQVAVKLVGDKGKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDVVLSDM 125
            QVAV+ VG+ GKV A D+L M  I GVDF+QGDFREE VL    +R+   +V +VLSDM
Sbjct: 63  CQVAVQRVGEGGKVFAIDLLEMQGIAGVDFMQGDFREESVLREFESRLAGRQVGLVLSDM 122

Query: 126 APNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKEAFKVV 185
           APN+SG +  DQ R++YL ELAL+   + L P+G+F VKVFQG GF+E++ A++E F+VV
Sbjct: 123 APNISGVNVSDQARSIYLCELALEFAREHLKPDGAFLVKVFQGSGFNEFLAAMRETFEVV 182

Query: 186 KTRKPDSSRARSREVYLVATGYK 208
            TRKP SSR RS E+YL+    K
Sbjct: 183 ATRKPKSSRDRSPELYLLGRRLK 205