Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase J (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 209 a.a., 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE from Pantoea sp. MT58

 Score =  310 bits (794), Expect = 1e-89
 Identities = 150/209 (71%), Positives = 176/209 (84%)

Query: 1   MSGKKRTASSNRWMLEHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGA 60
           M+GKKR+ASS RW+ EHF D YV  A K+GLRSRA FKL+E+QQ D+L +PGMTVVDLGA
Sbjct: 1   MTGKKRSASSGRWLQEHFSDKYVLQAHKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGA 60

Query: 61  APGGWSQVAVKLVGDKGKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDV 120
           APGGWSQ  V+ +G+KG+VIACDILPMDPIVGVDFLQGDFREE V+ ALL RVG  KV V
Sbjct: 61  APGGWSQYVVQQIGNKGRVIACDILPMDPIVGVDFLQGDFREESVINALLERVGDQKVQV 120

Query: 121 VLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKE 180
           V+SDMAPNMSG+  VD PR+MYLVELAL+MC  +LAP GSF VKVFQG+GFDEY++ ++ 
Sbjct: 121 VMSDMAPNMSGTPAVDIPRSMYLVELALEMCRDILAPGGSFVVKVFQGDGFDEYLREIRS 180

Query: 181 AFKVVKTRKPDSSRARSREVYLVATGYKL 209
            F  VK RKPD+SR+RSREVY+VATG KL
Sbjct: 181 LFTKVKIRKPDASRSRSREVYIVATGRKL 209