Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase J (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 220 a.a., 23S rRNA Um-2552 2'-O-methyltransferase from Paraburkholderia bryophila 376MFSha3.1

 Score =  183 bits (464), Expect = 2e-51
 Identities = 92/208 (44%), Positives = 131/208 (62%), Gaps = 12/208 (5%)

Query: 13  WMLEHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGAAPGGWSQVAVKL 72
           W+ +H +D YVK+AQ+ G R+RAA+KL+E+ ++D+LIRPG  +VDLG+ PG WSQ A   
Sbjct: 10  WLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGSTPGSWSQYARNK 69

Query: 73  V------------GDKGKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDV 120
           +            G  G +IA D+LPM+P+  V F+QGDFRE+ VL  L   VG  +VD+
Sbjct: 70  LAKGSRRDAEREGGIDGTIIALDVLPMEPVADVHFIQGDFREDSVLAQLEELVGERQVDL 129

Query: 121 VLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKE 180
           V+SDMAPN+SG    D  R  +L +LAL+     L P+G+  VK F G G+ + ++  K 
Sbjct: 130 VISDMAPNLSGVALADAARIEHLCDLALEFSQNHLKPDGALLVKCFHGSGYSQIVEKFKR 189

Query: 181 AFKVVKTRKPDSSRARSREVYLVATGYK 208
            FKVV  RKP +SR +S E +++    K
Sbjct: 190 QFKVVAARKPKASRDKSSETFILGKHLK 217