Pairwise Alignments

Query, 99 a.a., conserved hypothetical protein TIGR00253 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 127 a.a., ribosome assembly RNA-binding protein YhbY from Methanococcus maripaludis S2

 Score = 44.7 bits (104), Expect = 4e-10
 Identities = 24/88 (27%), Positives = 52/88 (59%), Gaps = 3/88 (3%)

Query: 1  MNLTTKQKQHLKGLAHNLKPVVLLGANGLTEGVLAEIESALAYHELIKVKVASADREL-- 58
          + +++K K+ L+  +H ++PVV +G  G+ E  + EI+  +    LIK+KV  +  E   
Sbjct: 7  VKISSKAKKILRSQSHEIEPVVWVGKEGI-EKTIEEIKRQIKDKSLIKIKVRKSALENGD 65

Query: 59 KNAIVDAIVRETQSAKVQLIGHILVIYR 86
          K  + + I +ET +  + ++G+++ I++
Sbjct: 66 KAEMAEKISKETGAEVISVVGNVITIFK 93