Pairwise Alignments

Query, 156 a.a., conserved hypothetical protein TIGR00246 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 156 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Vibrio cholerae E7946 ATCC 55056

 Score =  261 bits (666), Expect = 5e-75
 Identities = 121/156 (77%), Positives = 135/156 (86%)

Query: 1   MKLQLIAVGTRMPDWVTRGFEEYQRRFPRDMALELIEIPAGKRGKNADIVRILQKEGEQM 60
           MK+QLIAVGT+MP WV  GF+EY+RRFP DM LEL+EI AGKRGKNADI RILQKEGE M
Sbjct: 1   MKIQLIAVGTKMPKWVEEGFQEYRRRFPHDMPLELVEITAGKRGKNADIARILQKEGEAM 60

Query: 61  LAAIPKGNHIVTLDLPGKNWTTPELASAMNKWQLDGRDVSLLVGGPEGLAPACKEAAHQS 120
           LAA+PKGN IVTLD+PGK W T ELA  +  W+LDGRDVS+L+GGPEGLAPACK AA QS
Sbjct: 61  LAAVPKGNRIVTLDIPGKRWDTEELAVQLESWKLDGRDVSILIGGPEGLAPACKAAADQS 120

Query: 121 WCLSALTLPHPLVRIVVAESLYRAWSVNTNHPYHRE 156
           W LS LTLPHPLVR+V+AESLYRAWS+ TNHPYHRE
Sbjct: 121 WSLSPLTLPHPLVRVVMAESLYRAWSITTNHPYHRE 156