Pairwise Alignments

Query, 390 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 316 a.a., D-alanyl-D-alanine endopeptidase from Vibrio cholerae E7946 ATCC 55056

 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 22/280 (7%)

Query: 11  LLLISS--VSLPVYAAQPIVTPDAPT--------VAAKAYVLMDYYSGQIIAEENAYESL 60
           LL+ SS  +++P ++A    T  A          ++A + +++D  + +II   N     
Sbjct: 11  LLICSSLIIAIPAHSADSSTTTKAGVKKTVKKQELSANSALVIDLKTNEIIYSNNPDAVK 70

Query: 61  NPASLTKMMTSYV-IGQEIKAGNVSPDDDVTISKNAWSKNFSDSSKMFIEVGKTVKVSDL 119
             AS+TK+MT+ V +  ++      P   +TI      K         +++G  +   D+
Sbjct: 71  PIASVTKLMTAIVTLDAKLPMDAKLP---ITIKDAKEMKGVHSR----VKIGSEISRKDM 123

Query: 120 NRGIIIQSGNDACVAMAEHIAGTEGAFVDMMNSWSKQLGMRDSYFENSHGLDSENHKTTA 179
               ++ S N A  ++A H  G   AF+  MN+ +K LGM+++ F    GL ++N  T  
Sbjct: 124 LLLTLMSSENRAAASLAHHYPGGYKAFIKAMNAKAKALGMKNTRFVEPTGLSAKNVSTAR 183

Query: 180 YDMALLGAALIRDVPEEYRIYSEKYYTFN----GIKQYNRNGLLWDNSMNVDGIKTGHTS 235
             + LL A+    +  +     +K  TF+     +   N N L+ +++  +D  KTG T+
Sbjct: 184 DLVVLLKASKKYPLLGKLSATDKKTVTFSKPRYTLDFRNTNRLVHNDNWKIDLTKTGFTN 243

Query: 236 GAGYNLVASATKDGMRLISVVMGTQSEAARKAESKKLLTY 275
            AG+ LV        ++  VV+ T+ + +   ++ +L T+
Sbjct: 244 AAGHCLVMRTQMGRRQVAFVVLDTKGKLSPVGDANRLRTW 283