Pairwise Alignments

Query, 390 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 399 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Klebsiella michiganensis M5al

 Score =  413 bits (1061), Expect = e-120
 Identities = 205/364 (56%), Positives = 267/364 (73%), Gaps = 4/364 (1%)

Query: 30  PDAPTVAAKAYVLMDYYSGQIIAEENAYESLNPASLTKMMTSYVIGQEIKAGNVSPDDDV 89
           P AP + A++++L+DY SG+++AE NA    +PASLTKMMTSYVIGQ +KAG     D V
Sbjct: 35  PGAPQIDAESWILIDYNSGKVLAENNADSRRDPASLTKMMTSYVIGQAMKAGKFKESDLV 94

Query: 90  TISKNAWSKN---FSDSSKMFIEVGKTVKVSDLNRGIIIQSGNDACVAMAEHIAGTEGAF 146
           T+  +AW+     F  SS MF++ G  V VS L RGI +QSGNDACVAMA+++AG++ AF
Sbjct: 95  TVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADYVAGSQDAF 154

Query: 147 VDMMNSWSKQLGMRDSYFENSHGLDSENHKTTAYDMALLGAALIRDVPEEYRIYSEKYYT 206
           V +MN++   LG+++++F+  HGLD++   ++A DMAL+G AL+RDVP EY IY EK +T
Sbjct: 155 VSLMNNYVNALGLKNTHFQTVHGLDADGQFSSARDMALIGQALVRDVPNEYTIYKEKEFT 214

Query: 207 FNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATKDGMRLISVVMGTQSEAARK 266
           FNGI+Q NRNGLLWDNS+NVDGIKTGHT  AGYNLVASAT+  MRLIS VMG ++   R+
Sbjct: 215 FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTYKGRE 274

Query: 267 AESKKLLTYGFRFFETVTPYKAGDSFVTQQIWYGDKSTVDLGVATDTPITVSRGRAKDLK 326
           +ESKKLLT+GFRFFETV P KAG  F ++  W+GD     LGV  D  +T+ RGR KDLK
Sbjct: 275 SESKKLLTWGFRFFETVNPIKAGKEFASEPAWFGDSDRASLGVDKDVYLTIPRGRMKDLK 334

Query: 327 ANFELTK-PLDAPLKKGETVGRLYFQLDGKDIAQFPLVTLQEVNEGSWFSKLVDYFKQLF 385
           A++ L    L APL+K + VG + FQLDGK I Q PLV LQE+ EG++F K++DY K +F
Sbjct: 335 ASYVLNNAELHAPLQKNQVVGTINFQLDGKTIDQRPLVVLQEIPEGNFFGKIIDYIKLMF 394

Query: 386 SGWF 389
             WF
Sbjct: 395 HHWF 398