Pairwise Alignments

Query, 308 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 310 a.a., Uncharacterized protein conserved in bacteria from Pseudomonas stutzeri RCH2

 Score =  352 bits (903), Expect = e-102
 Identities = 192/300 (64%), Positives = 229/300 (76%), Gaps = 8/300 (2%)

Query: 4   ASLLTLLDDIASILDDVALMSKVAAKKTAGVLGDDLALNAQQVTGVSADRELPVVWAVAL 63
           +SLL L+DDIA++LDDV++M+KVAAKKTAGVLGDDLALNAQQVTGV ADRELPVVWAVA 
Sbjct: 3   SSLLALIDDIATVLDDVSVMTKVAAKKTAGVLGDDLALNAQQVTGVKADRELPVVWAVAK 62

Query: 64  GSFRNKLILVPAAMLISAFIPWAVTPLLMFGGLFLCFEGFEKLHHSYSHRKDKHSEQAEP 123
           GSFRNK ILVPAA+LISAF+PWA+TPLLM GG FLC+EGFEKL H + H+     ++   
Sbjct: 63  GSFRNKAILVPAALLISAFLPWAITPLLMLGGAFLCYEGFEKLAHRFLHKDHGEHDETVK 122

Query: 124 DVADIS-DLAAYEKEKVQGAIRTDFVLSAEIIAITLGIVADKSLSTQFFTLAVIGIVMTV 182
            +AD S D+ A+EK+K+ GA+RTDF+LSAEIIAITLG VA  S S Q   L  I I+MTV
Sbjct: 123 ALADPSVDMVAFEKKKISGAVRTDFILSAEIIAITLGTVAAASFSQQVLVLVGIAILMTV 182

Query: 183 GVYGLVAAIVKMDDAGLYLSQR-QGESSFTRFNRKVGFGLLSAAPLLMKSLTIIGTAAMF 241
           GVYGLVAAIVK+DD GL LS+R  G +S       VG G+LS AP LMKSL++IGTAAMF
Sbjct: 183 GVYGLVAAIVKLDDLGLALSKRASGVAS------AVGRGILSVAPWLMKSLSVIGTAAMF 236

Query: 242 MVGGGILTHGLHWVSEQIHHAEQWVSAIAVVGPVLGLLTPSVLNAFFGIAAGAVAVLLMT 301
           MVGGGILTHG+  V   I  +      +  VG VLG L P++L+A FGI AG V + L+T
Sbjct: 237 MVGGGILTHGIRAVHHFIESSAHDALGLPYVGAVLGGLLPTLLDAAFGIVAGGVVLALVT 296