Pairwise Alignments

Query, 308 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 311 a.a., DUF808 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  319 bits (818), Expect = 5e-92
 Identities = 172/317 (54%), Positives = 220/317 (69%), Gaps = 17/317 (5%)

Query: 1   MAGASLLTLLDDIASILDDVALMSKVAAKKTAGVLGDDLALNAQQVTGVSADRELPVVWA 60
           MAGASLLTLLDDIA++LDDVALMSK+AAKKTAGVLGDDLALNAQQV+GV+A+RE+PVVWA
Sbjct: 1   MAGASLLTLLDDIATVLDDVALMSKMAAKKTAGVLGDDLALNAQQVSGVAAEREIPVVWA 60

Query: 61  VALGSFRNKLILVPAAMLISAFIPWAVTPLLMFGGLFLCFEGFEKLHHSYSHRKDKH--- 117
           VA GSFRNKLILVPAA++IS+  PW + PLL+ GGLFLCFEG EK+   + H + K    
Sbjct: 61  VAKGSFRNKLILVPAALIISSIAPWLIMPLLLIGGLFLCFEGAEKILEKWLHPEPKQNAE 120

Query: 118 -------SEQAEPDVADISDLAAYEKEKVQGAIRTDFVLSAEIIAITLGIVADKSLSTQF 170
                  +E  E +      LA YEK K+ GAIRTDF+LSAEII I LG V   S+ TQ 
Sbjct: 121 QRAAAIVNEGLETESLATESLAEYEKRKIGGAIRTDFILSAEIIVIALGTVQGHSMLTQI 180

Query: 171 FTLAVIGIVMTVGVYGLVAAIVKMDDAGLYLSQRQGESSFTRFNRKVGFGLLSAAPLLMK 230
             +++I ++MT+GVYGLVA IVK+DD G YL   Q +S        +G  L+  AP LMK
Sbjct: 181 LVVSLIAVIMTIGVYGLVAGIVKLDDLGFYL---QRQSKGQGLKASLGGVLVRFAPKLMK 237

Query: 231 SLTIIGTAAMFMVGGGILTHGLHWVSEQIHHAEQWVSAIAVVGPVLGLLTPSVLNAFFGI 290
            LT++GTAAMF+VGGGI+ H +      +HH  + +  +    PV+G L P+++N   G+
Sbjct: 238 GLTVVGTAAMFLVGGGIVVHNV----PAVHHILEPMLDVVHAWPVVGTLMPTLMNGVIGV 293

Query: 291 AAGAVAVLLMTGIQKLR 307
            AG++ V +M    K+R
Sbjct: 294 VAGSLLVAVMEVWHKVR 310