Pairwise Alignments

Query, 308 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 288 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  233 bits (595), Expect = 3e-66
 Identities = 131/305 (42%), Positives = 191/305 (62%), Gaps = 27/305 (8%)

Query: 4   ASLLTLLDDIASILDDVALMSKVAAKKTAGVLGDDLALNAQQVTGVSADRELPVVWAVAL 63
           +    +LDDI +++DDVA+ +KVAAKKTAG+LGDDLA+NA++ TG  + RELPV+WA+  
Sbjct: 3   SGFFAILDDIGALMDDVAVTAKVAAKKTAGILGDDLAVNAEKSTGFLSSRELPVLWAITK 62

Query: 64  GSFRNKLILVPAAMLISAFIPWAVTPLLMFGGLFLCFEGFEKLHHSYSHR-KDKHSEQAE 122
           GSF NKLI+VP A+L++ F P A+  +L+ GGL+L +EG EK+   + HR K  H E  E
Sbjct: 63  GSFVNKLIIVPIALLLNFFFPVAIKVVLVLGGLYLAYEGVEKIVEYFIHRSKPSHVEAKE 122

Query: 123 PDVADISDLAAYEKEKVQGAIRTDFVLSAEIIAITLGIVADKSLSTQFFTLAVIGIVMTV 182
                I +    EK K++ AI TDF+LS EI+ I LG V ++ L  Q  T++ + ++ TV
Sbjct: 123 V----IQEGEVAEKAKIKSAIITDFILSIEIVIIALGSVLEEKLLIQILTVSAVALLATV 178

Query: 183 GVYGLVAAIVKMDDAGLYLSQRQGESSFTRFNRKVGFGLLSAAPLLMKSLTIIGTAAMFM 242
           GVYG+VA IV+MDD G  L +  GE         +G  L+ + P+++K L+++GT A+ +
Sbjct: 179 GVYGIVAIIVRMDDVGYRLMKASGEKGIF---SSIGNLLVRSLPVIIKILSVVGTVALIL 235

Query: 243 VGGGILTHGLHWVSEQIHHAEQWVSAIAVVGPVLGLLTPSVLNAF-FGIAAGAVAVLLMT 301
           V GGI  H + ++   +H    W               PS+L  F FG+AAG VAVL++T
Sbjct: 236 VSGGIFAHNVSFLHHVLH---TW---------------PSILREFAFGLAAGLVAVLVLT 277

Query: 302 GIQKL 306
             +KL
Sbjct: 278 TGKKL 282