Pairwise Alignments

Query, 308 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 307 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  425 bits (1092), Expect = e-124
 Identities = 216/308 (70%), Positives = 258/308 (83%), Gaps = 1/308 (0%)

Query: 1   MAGASLLTLLDDIASILDDVALMSKVAAKKTAGVLGDDLALNAQQVTGVSADRELPVVWA 60
           MAGASLLTLLDDIA+ILDDVALMSKVAA+KTAGVLGDDLALNAQQV+GV+ADRELPVVWA
Sbjct: 1   MAGASLLTLLDDIAAILDDVALMSKVAARKTAGVLGDDLALNAQQVSGVNADRELPVVWA 60

Query: 61  VALGSFRNKLILVPAAMLISAFIPWAVTPLLMFGGLFLCFEGFEKLHHSYSHRKDKHSEQ 120
           VA GS RNK ILVPAA+LISAFIPWAVTPLLMFGGLFLC+EGFEK++HS +H+ +    Q
Sbjct: 61  VAKGSLRNKCILVPAALLISAFIPWAVTPLLMFGGLFLCYEGFEKVYHSLTHKHEPAMSQ 120

Query: 121 AEPDVADISDLAAYEKEKVQGAIRTDFVLSAEIIAITLGIVADKSLSTQFFTLAVIGIVM 180
           +E   A   DL A+EK+KV GAIRTDFVLSAEIIAITLG+VA+ S  TQ  TLA+I ++M
Sbjct: 121 SEMAKA-AEDLKAFEKQKVAGAIRTDFVLSAEIIAITLGVVAESSFMTQVVTLAIIAVLM 179

Query: 181 TVGVYGLVAAIVKMDDAGLYLSQRQGESSFTRFNRKVGFGLLSAAPLLMKSLTIIGTAAM 240
           TVGVYGLVA IVK+DDAGLYLSQRQG+    R  RK+G GL++AAP LM+ LT++GT AM
Sbjct: 180 TVGVYGLVAGIVKLDDAGLYLSQRQGDGLLRRLGRKLGGGLVNAAPYLMRGLTVVGTIAM 239

Query: 241 FMVGGGILTHGLHWVSEQIHHAEQWVSAIAVVGPVLGLLTPSVLNAFFGIAAGAVAVLLM 300
           FMVGGGILTHG+H ++E    A  WV+ + +VGPVL  +TPS+LNA FG+  GAVA+++M
Sbjct: 240 FMVGGGILTHGIHQIAEVFEQAAHWVAGLTIVGPVLAWMTPSLLNALFGVLVGAVALVVM 299

Query: 301 TGIQKLRS 308
           + I +LR+
Sbjct: 300 SLIGRLRN 307