Pairwise Alignments

Query, 308 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 304 a.a., membrane protein containing DUF808 from Marinobacter adhaerens HP15

 Score =  333 bits (854), Expect = 3e-96
 Identities = 183/312 (58%), Positives = 225/312 (72%), Gaps = 22/312 (7%)

Query: 1   MAGASLLTLLDDIASILDDVALMSKVAAKKTAGVLGDDLALNAQQVTGVSADRELPVVWA 60
           MAG+SLL L+DDIA++LDDVALM+K A KKTAGVLGDDLALNAQQVTGV   RELPVV A
Sbjct: 1   MAGSSLLVLIDDIATVLDDVALMTKAATKKTAGVLGDDLALNAQQVTGVKPARELPVVLA 60

Query: 61  VALGSFRNKLILVPAAMLISAFIPWAVTPLLMFGGLFLCFEGFEKLHHSYSHRKDKHSEQ 120
           VA GS  NK ILVPAA+ IS F+PW VTPLLM GG FLCFEGFEKL H + HR+     +
Sbjct: 61  VARGSMINKAILVPAALAISFFMPWLVTPLLMLGGAFLCFEGFEKLVHKFLHREQDQKRK 120

Query: 121 AE-------PDVADISDLAAYEKEKVQGAIRTDFVLSAEIIAITLGIVADKSLSTQFFTL 173
            E       PDV    DL A EK+K++GAIRTDF+LSAEIIAITLG V  +++  QF  L
Sbjct: 121 GELREALKSPDV----DLRAIEKDKIKGAIRTDFILSAEIIAITLGTVTTQTIGMQFMVL 176

Query: 174 AVIGIVMTVGVYGLVAAIVKMDDAGLYLSQRQGESSFTRFNRKVGFGLLSAAPLLMKSLT 233
           AV+ I++TV VYGLVA IVK+DD GLYLSQ++         +++G G+L  AP LMK+L+
Sbjct: 177 AVVAILITVCVYGLVAGIVKLDDGGLYLSQQENP-----VLQQLGSGILWLAPYLMKTLS 231

Query: 234 IIGTAAMFMVGGGILTHGLHWVSEQIHHAEQWVSAIAVVGPVLGLLTPSVLNAFFGIAAG 293
           I+GT AMF+VGGGILTHGL  V + IHH  +  S +A      G+L P+V N  FG+ AG
Sbjct: 232 ILGTLAMFLVGGGILTHGLTPVYDAIHHFAEGFSGVA------GVLVPTVANGLFGVLAG 285

Query: 294 AVAVLLMTGIQK 305
           A+ V ++T + +
Sbjct: 286 ALLVAIVTPLTR 297