Pairwise Alignments

Query, 308 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 303 a.a., DUF808 family protein from Pantoea sp. MT58

 Score =  302 bits (774), Expect = 6e-87
 Identities = 164/310 (52%), Positives = 218/310 (70%), Gaps = 14/310 (4%)

Query: 1   MAGASLLTLLDDIASILDDVALMSKVAAKKTAGVLGDDLALNAQQVTGVSADRELPVVWA 60
           MAG SLLTLLDDIA++LDD+++M KVAAKKTAGVLGDDL+LNAQQVTGV A+RELPVVW 
Sbjct: 1   MAGTSLLTLLDDIATLLDDISVMGKVAAKKTAGVLGDDLSLNAQQVTGVKANRELPVVWG 60

Query: 61  VALGSFRNKLILVPAAMLISAFIPWAVTPLLMFGGLFLCFEGFEKLHHSYSHRKDKHSEQ 120
           VA GSF NKLILVP A++ISAF PW +TPLLM GG +LC+EG EK+ H+    K   S +
Sbjct: 61  VAKGSFLNKLILVPMALVISAFAPWLITPLLMIGGAYLCYEGVEKVMHTLQQDKQSKSPE 120

Query: 121 AEPDVADI---SDLAAYEKEKVQGAIRTDFVLSAEIIAITLGIVADKSLSTQFFTLAVIG 177
           A     D     + A +EK+K++GA+RTDF+LSAEI+AITLGIV+D  L  Q   LA I 
Sbjct: 121 ARKQRLDSLAKENAAEFEKKKIKGAVRTDFILSAEIVAITLGIVSDAPLLNQVIILAGIA 180

Query: 178 IVMTVGVYGLVAAIVKMDDAGLYLSQRQGESSFTRFNRKVGFGLLSAAPLLMKSLTIIGT 237
           I++T+GVYG+VAAIVK+DD G +L ++      +R  + +G  LL+AAP LMK L+++GT
Sbjct: 181 ILVTIGVYGIVAAIVKIDDLGFWLREKT-----SRLAQGIGSVLLAAAPWLMKILSVVGT 235

Query: 238 AAMFMVGGGILTHGLHWVSEQIHHAEQWVSAIAVVGPVLGLLTPSVLNAFFGIAAGAVAV 297
            AMF+VGGGI+ HG+      +HH    VS  +     + +L  +  N   G   G++ +
Sbjct: 236 IAMFLVGGGIVVHGI----APLHHLIGQVS--SGFNGWIAMLLSNGANLVLGFIIGSIVL 289

Query: 298 LLMTGIQKLR 307
           L++  I ++R
Sbjct: 290 LVVNLIARVR 299