Pairwise Alignments

Query, 396 a.a., hypothetical SAM-dependent methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 398 a.a., Predicted SAM-dependent methyltransferases from Pseudomonas stutzeri RCH2

 Score =  216 bits (550), Expect = 9e-61
 Identities = 129/394 (32%), Positives = 209/394 (53%), Gaps = 8/394 (2%)

Query: 5   IKLKPGREKSLERRHPWVFSNGIHNVKGKPE---PGQTVDVVAHDGHWLGRGAWSGESQI 61
           ++LK   ++ L   H WV+SN +            G    + A  G  LG    S  + I
Sbjct: 6   LRLKANADRRLRAGHLWVYSNEVDTAATPLAGFVAGDQAVLEAAGGKPLGIVGVSPNNLI 65

Query: 62  QVRVWTFDREEEIDREFFKRRILRAQAGRDDLIREQGLTGYRLIAAESDGLPGITIDKYA 121
             R+ + D +  +D+     RI  A + R+ L  +     YRL+  +SD LPG+ +D++ 
Sbjct: 66  CARLLSRDLKHSLDKSLLVHRIKVALSLRERLFEQPC---YRLVYGDSDLLPGLVVDRFF 122

Query: 122 NVLVCQLLSMGADVWRDTIVDVLAELYPDCAIYERSDVDSRKKEGLASTMGLLHGTLPEM 181
           ++LV QL S   +  +D +++ L ++     +  ++D  +R  EGL   +    G +PE 
Sbjct: 123 DILVVQLASATMERNKDAVLEALVQVLKPSGVLWKNDSSARDAEGLERYVDTAFGVVPEW 182

Query: 182 PLIIEENGIKIAVDVTKGHKTGFYLDQRDNRAIAARFVKGKSVLNCFCYTGTFGLYAAKA 241
            + +EENG+K    V +G KTG++ D R NRA  A +VKGK VL+ F Y G +G+ AA  
Sbjct: 183 -VALEENGVKFEAPVMQGQKTGWFYDHRMNRARLAPYVKGKRVLDLFSYIGGWGVQAAAF 241

Query: 242 GAASIENVDVSSLALDTARLNMRVNGLSDDNVHYNEADVFKLLRQYRDEGKTFDVIVLDP 301
           GA+ +  VD S+ ALD    N  +NG+++  +   E D F+ +++ ++  + F+V++ DP
Sbjct: 242 GASEVFCVDASAFALDGVERNAALNGVAE-KMTCVEGDAFEAMKELKNAEERFEVVITDP 300

Query: 302 PKFADNKSQLNGACRGYKDINMIALQLLNPGGVLLTFSCSGLMPADLFQKIVADAALDAK 361
           P F   K  L      Y+ +N  A++LLN  G+L++ SCS  +P D  Q I+  +A    
Sbjct: 301 PAFIKRKKDLKNGEAAYRRLNEAAMRLLNKDGILVSASCSMHLPEDDLQNILLGSARHLD 360

Query: 362 REIQFIERLSQASDHPIGSAFPEGFYLKGLVARV 395
           R IQ +ER +Q  DHP+  A PE  Y+K L  R+
Sbjct: 361 RNIQLLERGAQGPDHPVHPAIPETRYIKSLTCRI 394